Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_001716.2 Length=153080 Score E Sequences producing significant alignments: (Bits) Value seq3378 86.0 6e-12 >seq3378 Length=10801065 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 56850 AACCAGGGTACTATAACACAGATTATGAGCCATCATAATACTTGGATACAAACTTTGGAA 56909 ||||| || ||||||| | |||||||||||||||||| || || |||||| | ||| Sbjct 6858092 AACCAAAGTTGTATAACATAAATTATGAGCCATCATAATGCTAGGGTACAAAGATGCGAA 6858033 Query 56910 ATCAAAAACTACTGTTGGAGTAGCATAATAACCTATTTTCGGTTCTAAAACTGTAGCACC 56969 ||| | | | | ||| ||||||||||||| |||||||||| | || ||||| || Sbjct 6858032 ATCTAGAGTAGATATAGGATCAGCATAATAACCTCTTTTCGGTTCAATGACAGTAGCTCC 6857973 Query 56970 TT 56971 || Sbjct 6857972 TT 6857971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 489680600451200