Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq6704 87.8 1e-12 >seq6704 Length=10608496 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 96898 TAAACAGCCATGGGCATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCA 96957 ||||||||||| | ||||| ||| | |||| || || ||| || | |||| || Sbjct 4681653 TAAACAGCCATTGCCATTTCTATTTTTGGGTGTGGTTTGTAGCCCTCAATGATAAAATCT 4681594 Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGC 97017 | ||||||||| ||||||||| ||| || | |||||| | | || ||||||| Sbjct 4681593 TCGAATTTAAAATCGTCAATAGATTCAACTTTGCGAGCAAACATCAAAGTGGGGAAAGAT 4681534 Query 97018 CTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCA 97077 ||||| | | | | |||||| ||||||| |||||| |||| |||| |||| | Sbjct 4681533 CTGGGCTCCCTCTTCAACTGCTCAGTGAGAGGGATAATGTGGTTCATGTAAACATGAGTA 4681474 Query 97078 TCTCCTAAAGTGTGAATAAATTCTCCAG 97105 || ||| ||||| | ||| || |||| Sbjct 4681473 TCACCTGTTGTGTGCACAAACTCACCAG 4681446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346751274752510