Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq142 86.0 6e-12 >seq142 Length=7807734 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 16488 TTTCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATAT 16547 ||||||| |||| || || || || |||||||| |||||||| ||||| | || Sbjct 5994381 TTTCTTTTGGATCTCTGATGTATGTGTCAATTAGTAATGAGTACATTTCAGAATGTACAT 5994322 Query 16548 TCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGT 16607 | ||||| || || || || ||||| || |||| ||||| | | ||| || || Sbjct 5994321 TTTCCATAGCAATTTGGAACCCATAGAAAAATCTGGCTTCAGTCACTTGGACCTCCTGTG 5994262 Query 16608 AAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA 16667 | ||||||||| | | ||||| || ||||||||||| || || || || || | | Sbjct 5994261 AGAACCTTTCTACAAGATTTTCATTGACTATTCCATCTGATGCAGCGAAGAATGCCAAAA 5994202 Query 16668 TGTGTTTAATAAAAT 16682 || |||||||||| Sbjct 5994201 CATGCTTAATAAAAT 5994187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462467234619800