Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6704 93.3 3e-14 >seq6704 Length=10608496 Score = 93.3 bits (102), Expect = 3e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 20482 GCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATG 20541 || || ||||||||||||||||| |||||||| || |||||||| ||||||| | ||| Sbjct 4681034 GCCGACATGGGACTGGGTGTTCCCTTCAATATAGCCAGTTATGCTATGCTTACTCACATG 4681093 Query 20542 ATTGCACATGTTACAGATTTA 20562 ||||||||||| |||| |||| Sbjct 4681094 ATTGCACATGTGACAGGTTTA 4681114 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||| | || ||||| ||||| ||||||||||||||| ||| ||| |||||||||| Sbjct 4680312 GGTGATCTTGGCCCTGTCTATGGTTTTCAATGGAGACATAGTGGTGCTAAATATGTTGAT 4680371 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 || || |||| ||| |||||| | |||||| | ||||| |||||| | |||| Sbjct 4680372 GCTAAATCAGATTACACTGGGCAAGGAATTGATCAAATTCAAAAGGTTATTGACACAATT 4680431 Query 20338 AA 20339 || Sbjct 4680432 AA 4680433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399146329879135