Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq2271 86.0 7e-12 >seq2271 Length=4634553 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131864 ATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAATAGAT 131923 ||||||||||| || ||||||||||| | ||| ||||| |||||| || || Sbjct 3295179 ATGACTCCTGTACGTCCGATGTTGGCTGAGGCATGTAAATCTGTAGAAATGGCCATGAGG 3295120 Query 131924 AAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAATTCAT 131983 |||| | | ||||||||| ||| || |||| ||||| || || | || || | ||| Sbjct 3295119 AAATGTCCAAATGGAATGTTTTCTGAAATAAAGTATGACGGTGAAAGAGTCCAGGTGCAT 3295060 Query 131984 AAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCATAAA 132043 ||||||| | || | || ||||| | | |||||||||||| | |||||||| Sbjct 3295059 AAAAAAGGTGATCATTTCAGATATTTCTCTCGCGCTTTAAAACCTGTAATGCCTCATAAA 3295000 Query 132044 AT 132045 || Sbjct 3294999 AT 3294998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531849318651320