Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq142 109 7e-19 >seq142 Length=7807734 Score = 109 bits (120), Expect = 7e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | || || || ||||||||||| ||||||||||| || | |||||| ||||| Sbjct 5994371 ATCTCTGATGTATGTGTCAATTAGTAATGAGTACATTTCAGAATGTACATTTTCCATAGC 5994312 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 || || || ||||| ||| | || ||||||| | ||| || || | | ||||| | Sbjct 5994311 AATTTGGAACCCATAGAAAAATCTGGCTTCAGTCACTTGGACCTCCTGTGAGAACCTTTC 5994252 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 | | |||||||| ||||| ||||| || || ||||| || | ||||| || || Sbjct 5994251 TACAAGATTTTCATTGACTATTCCATCTGATGCAGCGAAGAATGCCAAAACATGCTTAAT 5994192 Query 37619 AAAATGTCTTTCA 37631 |||||| |||||| Sbjct 5994191 AAAATGCCTTTCA 5994179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592259471137720