Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3932 174 2e-37 seq1986 174 2e-37 seq142 104 4e-16 >seq3932 Length=1625400 Score = 174 bits (192), Expect = 2e-37 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||||||||| || ||||| |||||||||| ||||||| |||||| ||| Sbjct 1618751 TGTATTTGGTGACGGCCTTCGTTCCCTCACTGACGGCGTGCTTGGCCAGCTCGCCGGGCA 1618810 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||||| |||||| | ||| |||| ||| ||| |||||||| | Sbjct 1618811 GCAGCAGCCTCACGGAGGTCTGCACCTCCCGGGACGTGATTGTGGAACGCTTGTTGTAGT 1618870 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| ||||||| |||| ||||| || || |||||||||| Sbjct 1618871 GGGCCAAACGGGACGCCTCGGCAGCGATGCGTTCGAAGATGTCATTCACGAACGAGTTCA 1618930 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||||| || |||| || || |||||| || |||||||| |||||||||| Sbjct 1618931 TGATAGACATCGCCTTACTGGATATACCAGTGTCGGGATGAACCTGCTTCAGCACCTTGT 1618990 Query 1485710 A 1485710 | Sbjct 1618991 A 1618991 >seq1986 Length=5217794 Score = 174 bits (192), Expect = 2e-37 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||||||||| || ||||| |||||||||| ||||||| |||||| ||| Sbjct 20815 TGTATTTGGTGACGGCCTTCGTTCCCTCACTGACGGCGTGCTTGGCCAGCTCGCCGGGCA 20756 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | ||||| |||||| | ||| |||| ||| ||| |||||||| | Sbjct 20755 GCAGCAGCCTCACGGAGGTCTGCACCTCCCGGGACGTGATTGTGGAACGCTTGTTGTAGT 20696 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| ||||||| |||| ||||| || || |||||||||| Sbjct 20695 GGGCCAAACGGGACGCCTCGGCAGCGATGCGTTCGAAGATGTCATTCACGAACGAGTTCA 20636 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||||| || |||| || || |||||| || |||||||| |||||||||| Sbjct 20635 TGATAGACATCGCCTTACTGGATATACCAGTGTCGGGATGAACCTGCTTCAGCACCTTGT 20576 Query 1485710 A 1485710 | Sbjct 20575 A 20575 >seq142 Length=7807734 Score = 104 bits (114), Expect = 4e-16 Identities = 144/201 (72%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 794361 TTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACA 794420 ||| ||||| || || || |||||||| || | |||||| ||||| ||||||| | Sbjct 5994993 TTCATTGCTGAATGTAAGTCCAGGCATGAGTCCTCTCTTCTTCAGCCAGAAGATGGAAGC 5994934 Query 794421 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAA 794480 ||||||||||| || |||||||| || || || || ||| |||||| || || |||| Sbjct 5994933 AAAACTGCCCGAAAAGAAGATGCCTTCAACTGCAGCGAAGGCGACGATACGTTCACCAAA 5994874 Query 794481 AGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACC 794538 || ||| |||| || |||||||| | ||||| || ||||| || |||| Sbjct 5994873 TGT-----GGCTGTCTTGCTGGCGATCCACTGTAGAGCCCAGTCAGCCTTCTTTTTCACA 5994819 Query 794539 GAGGGCACCGTGTCGATGGCG 794559 |||||| || || |||||| Sbjct 5994818 CAGGGCAGAGTCTCAATGGCG 5994798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915422741774177