Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq6704 84.2 2e-11 >seq6704 Length=10608496 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 118921 GACCCATTAGCATTCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAA 118980 || ||||| |||| ||||||| ||||| |||| || ||| | |||| || || || Sbjct 4680171 GATCCATTGGCATCCCAAATATGTACTCCCTTTTCAGCAAGAGCCTTAGTGTCAGTTGAC 4680112 Query 118981 CCACTTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTA 119040 ||| | | |||||| ||||| | || || ||| | || ||| ||||||| ||| Sbjct 4680111 CCAGAGAGCATCCAAAGTAGCTCATAAATTACTCCTTTTGTGAATACTCTTTTTGTCGTA 4680052 Query 119041 AACAGTGGAAACTGACC--TCTA-AGTGAATATCTTGTTTGTGTTCCAAAAATAGACAGA 119097 | ||||| || | ||| || ||||||||| | |||||||||||| ||| Sbjct 4680051 AGTAGTGGCAAAGTATTATTCTTTAGAGAATATCTTTGCATAGCTCCAAAAATAGAAAGA 4679992 Query 119098 GTCCCAACACCTGTTCTATCATCTCTCTTG 119127 || ||||||||||| | ||| |||| ||| Sbjct 4679991 GTACCAACACCTGTGCGGTCAACTCTTTTG 4679962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414437686731052