Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plodia_20interpunctella_20[genbank_20GCA_5F900182495.1_202017-05-06] 7,743 sequences; 382,235,502 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq142 136 4e-27 >seq142 Length=7807734 Score = 136 bits (150), Expect = 4e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || ||||| ||||||||||| |||||||||||||| | |||||| ||||| Sbjct 5994371 ATCTCTGATGTATGTGTCAATTAGTAATGAGTACATTTCAGAATGTACATTTTCCATAGC 5994312 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 ||| || |||||||| ||| |||| ||||||| || ||| || || | | || |||| Sbjct 5994311 AATTTGGAACCCATAGAAAAATCTGGCTTCAGTCACTTGGACCTCCTGTGAGAACCTTTC 5994252 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | | |||||| || || || ||||| ||||| ||||| || | ||||| || || Sbjct 5994251 TACAAGATTTTCATTGACTATTCCATCTGATGCAGCGAAGAATGCCAAAACATGCTTAAT 5994192 Query 23952 AAAATGTCTTTCA 23964 |||||| |||||| Sbjct 5994191 AAAATGCCTTTCA 5994179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521437526480200