Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_000902.1
Length=60942
Score E
Sequences producing significant alignments: (Bits) Value
seq997 302 2e-77
>seq997
Length=29618
Score = 302 bits (334), Expect = 2e-77
Identities = 372/508 (73%), Gaps = 13/508 (3%)
Strand=Plus/Minus
Query 25549 CTGCCGTTCTGGCGCTG--ATTGCCGCAGGTGCTTCTGCGCCTGAAATCCTCGACCAGTT 25606
|||| ||||||| |||| |||| || |||||| |||| | | ||| ||||| |||||
Sbjct 20900 CTGCAGTTCTGGGGCTGGTATTG--GCTGGTGCTCCTGCATCCGTAATTCTCGATCAGTT 20843
Query 25607 TCTGGATGAAAAGGAAGGTAACCACACCACAGCATACCGTGATGGTGCGGGTATCTGGAC 25666
|||| ||||||| || |||||| | ||| || ||| ||||||| ||||| |||||
Sbjct 20842 TCTGAATGAAAAAGAGGGTAACAGCCTCACGGCCTACAAAGATGGTGGTGGTATTTGGAC 20783
Query 25667 CATCTGCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTTATTCCTGGCATGAAGCTGTC 25726
|| ||||| || || || ||| ||| |||| || ||| | | |||||||| || |
Sbjct 20782 TATTTGCCGCGGCGCAACGATGGTTGATCGTAAACCGGTTGTGCAGGGCATGAAATTGAC 20723
Query 25727 GAAGGAAAAATGCGACCGGGTTAACGCCATTGAGCGTGATAAGGCGCTGGCATGGGTGGA 25786
||| |||||| | | ||| || || || || || ||||||| ||||||||||| ||
Sbjct 20722 ACAGGCCAAATGCAATCTGGTGAATGCTATCGAACGCAATAAGGCTCTGGCATGGGTTGA 20663
Query 25787 GAAAAACATCAAAGTGCCGCTGACCGAACCCCAGAAAGCGGGGATCGCGTCATTCTGTCC 25846
|| || || ||||| |||||||| |||||||| || ||||| || ||||||||
Sbjct 20662 CCGCAATATTTCGGTACCGCTTACCGAACCGCAGAAAGCTGGAATCGCATCTTTCTGTCC 20603
Query 25847 GTACAACATTGGTCCCGGTAAGTGTTTCCCGTCGACGTTTTACAGACGAATTAATGCAGG 25906
||||||||| || || |||||||| |||||||| ||||| || | || || ||||| ||
Sbjct 20602 GTACAACATCGGGCCGGGTAAGTGCTTCCCGTCAACGTTCTATAAGCGCATCAATGCCGG 20543
Query 25907 TGATCGAAAAGGTGCCTGCGAAGCTATTCGCTGGTGGATTAAGGACGGTGGCAGAGACTG 25966
||| || || || ||||| || |||||||||||||||| |||| |||| | |||||
Sbjct 20542 TGACCGCCCCGGGGCATGCGAGGCAATTCGCTGGTGGATTAGAGACGCTGGCCGCGACTG 20483
Query 25967 CCGTATTCGTTCA---------AACAACTGTTACGGTCAGGTATCCCGTCGTGACCAGGA 26017
||| | | | ||| ||| |||||||||||| || || ||||||||
Sbjct 20482 CCGCCTGACTAAAGGCCAGAAGAACGGCTGCTACGGTCAGGTAGAACGGCGAGACCAGGA 20423
Query 26018 GAGCGCGCTGGCGTGCTGGGGAATCGAC 26045
|| || ||||||||||||| || |||
Sbjct 20422 AAGTGCTTTGGCGTGCTGGGGGATAGAC 20395
Score = 208 bits (230), Expect = 3e-49
Identities = 294/411 (72%), Gaps = 13/411 (3%)
Strand=Plus/Minus
Query 27114 AACCATTACCGTGACAACGCGCTCACCTACAAAGCGCAGCGCGATAAAAAAGCCAGAGAG 27173
||||| || || |||||||| |||||||||||| ||||||||||||| |||| |||
Sbjct 18185 AACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAA---GCCACTGAG 18129
Query 27174 ---CTGGAACAGGCGAATGCCACCATTACTGACATGCAGGTGCGCCAGCGTGATGTTGCT 27230
|| ||||| || |||||||| | ||||||||| ||||||||||||| |||
Sbjct 18128 AAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCT 18069
Query 27231 GCGCTCGATGCAAAATACTCGAGGGAGTTAGCCGATGCGAGAGCTGAAAATGAAACTCTG 27290
||||| ||||| |||||| | | || || ||||||| || | | ||| ||||
Sbjct 18068 GCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAGCGTCTG 18009
Query 27291 CGTGCTGATGTTGCCGCTGGTCGTAAGCGCCTGCGGATCAACGCCACCTGCTCCGGTACC 27350
| | ||||| ||||| |||||||| |||| | ||||||| | || || ||
Sbjct 18008 CATAGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACT------GTCCC 17955
Query 27351 GTGCGTGAAGCCACCGGCACCTCCGGCGTGGATAATGCAACCGGCCCCCGACTGGCAGAC 27410
| | | ||| ||||||||| |||| ||| |||| |||||||| |||| | |||
Sbjct 17954 GCGAACGGAGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGAC 17895
Query 27411 ACCGCTGAACGGGATTATTTCATCCTCAGAGAACGGTTGATGACAATGCAGAAGCAGCTG 27470
||||||||||||||||||||||||||||| | || | | ||| || ||||||| |
Sbjct 17894 TCCGCTGAACGGGATTATTTCATCCTCAGAAAGCGAATCGTCACAGTGACGAAGCAGGTC 17835
Query 27471 GAAGGGGCACAGGACTATATCCGCACTCAGTGCCTGAACT-AAGTTTTGCT 27520
| ||| |||| || ||||||||||| | || | ||||||| ||
Sbjct 17834 GGCTATCTGCAGAACTACATAAGCACTCAGTGCTTAAAATAAAGTTTTTCT 17784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194888648052512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |