Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq170 86.0 5e-12 >seq170 Length=689707 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| |||||||| | ||| | |||| |||| || ||||| || || | ||||| || Sbjct 654643 TTATACAGCCATTTCCATATCAATTTTAGGATGAGGGTTGTATCCTTTGATTATAAAATC 654584 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652 || ||| |||||||||||| | | ||||||||||| || || || ||||| Sbjct 654583 TTCATATTTGAAGTCATCAATGGAGTCTATTTTTCTAGCAAACTCCAGGGTAGGGAACGG 654524 Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712 ||| || || | | |||| | || |||| || ||||||| || || | |||| Sbjct 654523 TCTTGGCTCTCTCTCTAGCTGCTTCTTGAGAGGCTCTATGTGATTTAGGTACACATGAGT 654464 Query 101713 ATCTCCTATAGTATGGATAAACTCTCC 101739 ||| ||| | ||||| | |||||| || Sbjct 654463 ATCACCTGTTGTATGAAGAAACTCACC 654437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361243301468294