Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq170 104 3e-17
seq117 104 3e-17
seq754 87.8 2e-12
>seq170
Length=689707
Score = 104 bits (114), Expect = 3e-17
Identities = 124/166 (75%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805
||| || || || | || || | ||| | ||| ||||| | ||||||||||||||||||
Sbjct 654330 CTCAAGTCCAGTAATATGTGCTATCATATGGGTGAGCAGAGCGTAGCTGGCTATGTTGAA 654271
Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865
||||| ||||| |||||||| | ||||||||||| | |||||||||| || |
Sbjct 654270 TGGCACACCCAGGCCCATGTCTGCACTCCGCTGGTACAGTAGACAGGAGAGCTTGCCACT 654211
Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
||||||| |||||| ||| ||| || || || |||| |||||
Sbjct 654210 GGCCACGTGGAACTGCGCA-AGGCAATGACATGGTGGCAATGCCAT 654166
>seq117
Length=882221
Score = 104 bits (114), Expect = 3e-17
Identities = 124/166 (75%), Gaps = 2/166 (1%)
Strand=Plus/Plus
Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805
||| || || || | || || | ||| | ||| ||||| | ||||||||||||||||||
Sbjct 413030 CTCAAGTCCAGTAATATGTGCTATCATATGGGTGAGCAGAGCGTAGCTGGCTATGTTGAA 413089
Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865
||||| ||||| |||||||| | ||||||||||| | |||||||||| || |
Sbjct 413090 TGGCACACCCAGGCCCATGTCTGCACTCCGCTGGTACAGTAGACAGGAGAGCTTGCCACT 413149
Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
||||||| |||||| ||| ||| || || || |||| |||||
Sbjct 413150 GGCCACGTGGAACTGTGCA-AGGCAATGACATGGTGGCAATGCCAT 413194
>seq754
Length=71200
Score = 87.8 bits (96), Expect = 2e-12
Identities = 112/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 145789 TAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGG 145848
|||||||| ||||| || |||| || || || || | || |||||||| ||||||
Sbjct 66557 TAGCTGGCAATGTTAAACGGCAGGCCGAGGAACACATCACAGGAACGCTGGTAGAGCTGG 66498
Query 145849 CAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCC 145908
|||||||||| ||| | || |||||||||||| | | |||||| || | ||| |||
Sbjct 66497 CAGGAGAGCTTTCCGTCAGCGACGTAGAACTGGAAGAACGCGTGGCACGGTGCCAGCGCC 66438
Query 145909 ATGGCGGGCAGGTCCGCCGG-GTTCCAGGCGG 145939
|| | ||| || |||| |||||||||||
Sbjct 66437 ATTTTGTCCAGCTC-GCCGACGTTCCAGGCGG 66407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590063567527760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |