Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq170 104 3e-17 seq117 104 3e-17 seq754 87.8 2e-12 >seq170 Length=689707 Score = 104 bits (114), Expect = 3e-17 Identities = 124/166 (75%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 ||| || || || | || || | ||| | ||| ||||| | |||||||||||||||||| Sbjct 654330 CTCAAGTCCAGTAATATGTGCTATCATATGGGTGAGCAGAGCGTAGCTGGCTATGTTGAA 654271 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||| ||||| |||||||| | ||||||||||| | |||||||||| || | Sbjct 654270 TGGCACACCCAGGCCCATGTCTGCACTCCGCTGGTACAGTAGACAGGAGAGCTTGCCACT 654211 Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 ||||||| |||||| ||| ||| || || || |||| ||||| Sbjct 654210 GGCCACGTGGAACTGCGCA-AGGCAATGACATGGTGGCAATGCCAT 654166 >seq117 Length=882221 Score = 104 bits (114), Expect = 3e-17 Identities = 124/166 (75%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 ||| || || || | || || | ||| | ||| ||||| | |||||||||||||||||| Sbjct 413030 CTCAAGTCCAGTAATATGTGCTATCATATGGGTGAGCAGAGCGTAGCTGGCTATGTTGAA 413089 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||| ||||| |||||||| | ||||||||||| | |||||||||| || | Sbjct 413090 TGGCACACCCAGGCCCATGTCTGCACTCCGCTGGTACAGTAGACAGGAGAGCTTGCCACT 413149 Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 ||||||| |||||| ||| ||| || || || |||| ||||| Sbjct 413150 GGCCACGTGGAACTGTGCA-AGGCAATGACATGGTGGCAATGCCAT 413194 >seq754 Length=71200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 145789 TAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGG 145848 |||||||| ||||| || |||| || || || || | || |||||||| |||||| Sbjct 66557 TAGCTGGCAATGTTAAACGGCAGGCCGAGGAACACATCACAGGAACGCTGGTAGAGCTGG 66498 Query 145849 CAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCC 145908 |||||||||| ||| | || |||||||||||| | | |||||| || | ||| ||| Sbjct 66497 CAGGAGAGCTTTCCGTCAGCGACGTAGAACTGGAAGAACGCGTGGCACGGTGCCAGCGCC 66438 Query 145909 ATGGCGGGCAGGTCCGCCGG-GTTCCAGGCGG 145939 || | ||| || |||| ||||||||||| Sbjct 66437 ATTTTGTCCAGCTC-GCCGACGTTCCAGGCGG 66407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590063567527760