Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq197 86.0 9e-12 >seq197 Length=620651 Score = 86.0 bits (94), Expect = 9e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || || || ||||| || || || | || | ||||| Sbjct 449564 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACAATTACCCTGGAAGTGGAAGCCTCA 449505 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | || || || ||||| ||||| || || || || || || Sbjct 449504 GACACAATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 449445 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || |||||||| ||||| || |||||| | || || | || || || Sbjct 449444 CAGAGGTTGATCTTTGCAGGCAAACAGTTGGAGGATGGCCGCACCCTGTCTGACTACAAC 449385 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || || |||| ||||| | ||| | ||||||||||| Sbjct 449384 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGTGGTAT 449335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755439058899200