Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_002167.1
Length=39732
Score E
Sequences producing significant alignments: (Bits) Value
seq1547 1626 0.0
seq997 477 3e-130
>seq1547
Length=4346
Score = 1626 bits (1802), Expect = 0.0
Identities = 1531/1939 (79%), Gaps = 15/1939 (1%)
Strand=Plus/Minus
Query 15640 AAACGACGTCTGGTTATGAGCGCAGCCACCGTATCGATTTACCGCAGGCTGGCAGCACAT 15699
|||| || ||||||||||| |||||||||||||| |||||||| ||||| |||||||| |
Sbjct 4346 AAACCACCTCTGGTTATGAACGCAGCCACCGTATTGATTTACCTCAGGCGGGCAGCACCT 4287
Query 15700 GGACAATACGTCTGCGTAAGATTACCTCTGACGCCAACAGCGCGAAGATCGGCGACACGA 15759
|||| || | ||||| || ||||| | || ||||| ||||||||||| ||||||||||
Sbjct 4286 GGACCATCAGGCTGCGCAAAATTACAGCCGATGCCAATAGCGCGAAGATTGGCGACACGA 4227
Query 15760 TGATGCTGCAGAGCTTCACCGAGGTGATTGATGCCAAACTGCGCTACCCGAACACCGCGC 15819
||| |||||| ||||||||||| || || || |||||||| ||||| |||||||||||||
Sbjct 4226 TGACGCTGCAAAGCTTCACCGAAGTAATCGACGCCAAACTTCGCTATCCGAACACCGCGC 4167
Query 15820 TGCTCTACGTCGAATTCGACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCG 15879
| || ||| ||||||| || || ||||||||||| ||||| ||||| |||||||| ||||
Sbjct 4166 TACTGTACATCGAATTTGATTCGAGCCAGTTCAATGGCTCAATTCCGCAAATTTCCTGCG 4107
Query 15880 AACCGCGCGGCCGCGTTATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATA 15939
| || ||||| || ||||| || || || |||||||| ||||| ||||| || || || |
Sbjct 4106 AGCCTCGCGGACGTGTTATTCGTGTGCCCGATACCTATGACCCGGAAACACGAACGTACA 4047
Query 15940 GCGGTACATGGACCGGTGCGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTT 15999
|||| || ||||| || || ||||||||||||||||||||||||||||||||||| ||||
Sbjct 4046 GCGGCACCTGGACGGGCGCATTTAAGTGGGCATGGACGGATAACCCTGCGTGGATATTTT 3987
Query 16000 ACGACCTGGTTGTTTCTGACCGGTTCGGCCTTGGGCACCGTTTGACCGCTGCGAATATTG 16059
|||| ||||| || ||||||| ||||||||||| | || | || || || || || |
Sbjct 3986 ACGATCTGGTGGTCACTGACCGCTTCGGCCTTGGTAATCGGCTAACGGCAGCCAACATCG 3927
Query 16060 ATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAG 16119
| |||||||| ||||||||||| ||||| ||||||||||| |||||| || || || |
Sbjct 3926 ACAAATGGACTCTTTATCAGGTCGCTCAATATTGTGATCAATCGGTACCGGATGGTAAGG 3867
Query 16120 GGGGCAACGGTACAGAACCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACG 16179
| |||| ||| || ||||||||||| ||||||||||| |||||||| || || || ||||
Sbjct 3866 GCGGCAGCGGAACTGAACCACGTTACACCTGCAACGTATACATTCAAGATCGAAATGACG 3807
Query 16180 CCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGG 16239
| ||||| |||||||| ||||||||||| || || || ||||||||||||||||| | |
Sbjct 3806 CTTACACCGTCCTGCGAGATTTTGCCGCCATTTTTCGAGGCATGACCTACTGGGGAGACG 3747
Query 16240 ATCAGATTGTGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTA 16299
| |||||||| ||||| || |||||||| | ||||| |||| | ||| |||| |||||
Sbjct 3746 ACCAGATTGTTGCCCTTGCAGACATGCCCAGAGATGTCGATTTTACCTACACGCACGCTA 3687
Query 16300 ACGTTGTTGGCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAG 16359
|||| || | ||| || ||||| || ||||| || ||||| |||||||| | |
Sbjct 3686 ACGTAGTCGACGGCAAATTTGTGTATTCCAGTAGCACAACTAAAAGTCGCTACACAAACG 3627
Query 16360 CGCTGGTTTCATGGTCAGACCCGGGTAACGCTTATGCCGACGCGATGGAACCGGTATTTG 16419
| || || || ||||| || |||| || | ||||| || || ||||| || || || |
Sbjct 3626 CTCTTGTATCCTGGTCTGATCCGGCAAATGGCTATGCTGATGCAATGGAGCCAGTCTTCG 3567
Query 16420 AGCAGGCGCTGGTGGCGCGGTACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCA 16479
| |||| |||||||||||| || || ||||| ||||| || || || |||||||| ||||
Sbjct 3566 AACAGGAGCTGGTGGCGCGCTATGGTTTCAACCAGCTCGAGATCACCGCCATCGGTTGCA 3507
Query 16480 CCAGGCAGTCAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCTCACCAATAACAAGGATC 16539
|| ||||||| ||||| ||| | || ||||||||||| || || ||||| || || |||
Sbjct 3506 CCCGGCAGTCTGAGGCTAACAGGAAAGGGCGCTGGGGGATCCTGACCAACAATAAAGATA 3447
Query 16540 GCGTTGTTTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCG 16599
| |||| ||||||| || || |||||||| || ||||| |||||||||||||| || |
Sbjct 3446 GGATTGTAACGTTTGACGTTGGTCTGGACGGTAATATTCCTCAGCCGGGCTACATAATTG 3387
Query 16600 CCGTGGCAGA-CGAGCTGCTTTCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAAC 16658
| || | || ||| | ||||| |||| | | | ||||| || | ||| |||||
Sbjct 3386 CTGTTTCTGATCGAAAT-CTTTCAGGAAGAGATTTAGGCGGTCGATTATCCGCGGTTAAT 3328
Query 16659 GGTCGCGTTATCAAACTTGACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTC 16718
|| || ||| ||||||||||||| ||| | ||| | ||||| | | || |
Sbjct 3327 GGGCGTGTTCTCAAACTTGACCGGGTACCAAGTGCTAAGGCCGGTGACAGGATAATGGTA 3268
Query 16719 AACCTGCCTTCCGGAGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAATCAGTC 16778
|||||||| || || | || | | || |||||| || || ||| ||| |||
Sbjct 3267 AACCTGCCATCGGGTATCACTCAATCCCGAACGATTCAGTCCCTGTCCGGTGAAATGGTC 3208
Query 16779 ACAGTCACCACGGCATACAGTGAGACGCCACAGGCCGAAGCTGTTTGGGTGGTTGAATCT 16838
|| || ||||| || | || ||| ||||||||||| ||||| ||||| ||||||||
Sbjct 3207 ACCGTGACCACCGCTTTTAGCGAGCTTCCACAGGCCGAGGCTGTATGGGTTATTGAATCT 3148
Query 16839 GACGAGCTTTACGCGCAGCAGTATCGTGTTGTCAGCGTTTCCGATAACAATGATGGCACT 16898
|| || || || ||||||||||| | || | || || ||||||||||||| || |||
Sbjct 3147 GATGAACTCTATGCGCAGCAGTACAGGGTAATTAGTGTCACCGATAACAATGACGGGACT 3088
Query 16899 TTCTCGATTACCGGCGCATGGCACGACCCGGATAAATATGCCCGTATCGATACCGGAGCC 16958
| | || || || ||| ||||| |||||||||| | || || ||||||||||||
Sbjct 3087 TATACCATCACGGGGGCAAATCACGATCCGGATAAATTCGATCGCATTGATACCGGAGCC 3028
Query 16959 ATCATTGACCAACGGCCGGTGAGCGTGATCCCGCCGGGCAACCAGTCGCCGCCTGCGAAT 17018
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3027 ATGATTGACCAGCGGCCGGTGAGCGTGATCCCGCCGGGCAACCAGTCGCCGCCTGCAAAC 2968
Query 17019 ATCGTGATCAGCTCGTTTTCCGTGGTTCAGCAAAATATCAGCGTCGAAACAATGCGCGTG 17078
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 2967 ATCGTGATCAGCTCGTTTTCCGTGGTGCAGCAAAATATCAGCGTCGAAACGATGCGCGTG 2908
Query 17079 AGCTGGGACCAGGCGCAGAACGCTATCGCCTATGAAGCGCAATGGCGCCGCAACGACGGG 17138
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2907 AGCTGGGACCAGGCGCAGAACGCTATCGCCTATGAAGCGCAATGGCGCCGCAACGAGGGG 2848
Query 17139 AACTGGGTTAACGTGCCGCGCACCTCCACCACGTCATTCGACGTCCCGGGGATTTATGCC 17198
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||
Sbjct 2847 AACTGGGTTAACGTGCCGCGCAGCTCCACCACGTCATTCGACGTTACGGGGATTTATTCC 2788
Query 17199 GGGCGCTACCTGGTGCGGGTGCGCGCAATCAATGCCGCAGAAATTTCATCCGGATGGGGC 17258
||||| ||||||||||| ||||| || ||||| || || |||||||| |||||||||||
Sbjct 2787 GGGCGGTACCTGGTGCGCGTGCGTGCTATCAACGCAGCGGAAATTTCTTCCGGATGGGGA 2728
Query 17259 TATTCAGAAGAGAAAACGCTGACGGGTAAAGTGGGCAATCCACCGAAGCCGGTTGGCTTT 17318
|||||||||||||| ||| |||| || ||||||||||||||||| ||||| || || ||
Sbjct 2727 TATTCAGAAGAGAAGACGTTGACCGGCAAAGTGGGCAATCCACCTAAGCCAGTAGGATTC 2668
Query 17319 ATCGCCTCTG--AAAACGTGGTGTTCGGTATCGAGCTGAACTGGGGATTCCCGGCGAATA 17376
| |||| | | | | ||| || || || |||||||| |||||||| || |
Sbjct 2667 ACCGCCACGGGCATTAACTGG-----GGGATTCGTCTTAACTGGGGTTTCCCGGCAAACA 2613
Query 17377 CCGACGACACGCTGAAGACGGAAATTCAGTACA-GCCTGACCGGTACTGAAGACGATGCC 17435
||| ||| ||||| || |||||||||||||||| | || | ||| | ||| ||
Sbjct 2612 CCGGCGATACGCTAAAAACGGAAATTCAGTACACAGCAAACAGTGACTTTTCA-GAT-CC 2555
Query 17436 ATGC-TGCTGGCCGATGTGCCTTA-CCCGCAGCGCAAATATCAGCAGATGGGCCTTAAGG 17493
|| | |||| | || |||||||| || | ||| |||| ||| | |||||||| |
Sbjct 2554 ATTCTTGCTCTCAGACGTGCCTTATCCATCTGCG-GAATACACCCAGCTCGGCCTTAAAG 2496
Query 17494 CTGGGCAGATTTTCTGGTACCGCGCGCAGCTGGTTGACCGCAGCGGTAACGAGTCAGGTT 17553
| |||||| |||||||||||||| ||||| || ||| | | ||||||||||| || |
Sbjct 2495 CAGGGCAGGAATTCTGGTACCGCGCACAGCTTGTCGACAGAACGGGTAACGAGTCCGGGT 2436
Query 17554 ATACCGGCTGGGTTCGTGG 17572
|||||| |||| | || ||
Sbjct 2435 ATACCGACTGGATCCGGGG 2417
>seq997
Length=29618
Score = 477 bits (528), Expect = 3e-130
Identities = 577/785 (74%), Gaps = 3/785 (0%)
Strand=Plus/Minus
Query 12014 AAGCAACATTCATCCAGGCATTTAAACCATGAGCTTAAACGCAGACTATCAGAAGCTTGA 12073
||||||| |||| ||||||| ||||||| | | | ||| ||||| || ||
Sbjct 785 AAGCAACCTTCAAACAGGCATACGCACCATGA---TTACTGAAGATTATCAACGCCTCGA 729
Query 12074 ATCCGGAAACGATGTTCGTCTGATTGAGGTGGACGGTTCTTCCTTTGGGCTAACGGACGT 12133
| | || || | | ||||| ||||||| ||||||||| | ||||| || |||||
Sbjct 728 ACCGGGTAAAAAAATACGTCTTCTTGAGGTAGACGGTTCTGCGTTTGGTCTGGACGACGT 669
Query 12134 TCTCCGCTTTCACAATTACAGCATTCCCCACACGGAAGCGGAAATCATCGCCGCTGGTGG 12193
||| ||||||||| ||| | | | || || || | || || || || ||||||||
Sbjct 668 TCTGCGCTTTCACGCTTATAACCTCCCGCATACTGCAGAAGAGATTGCGGCTGCTGGTGG 609
Query 12194 TGATGAGTCCAAGCTACCGGCGAAACCAATCTGGTGGCAGGGAAATGAATACGCCGCCTG 12253
|| || || ||| || |||||| |||||||||||||| | || || | |||||
Sbjct 608 CGACGAATCAAAGTTAAAGGCGAAGAGTATCTGGTGGCAGGGCGAAGAGTATGGTGCCTG 549
Query 12254 GCCGTATCAGCTGGAAGGCCTGGAAAAATCAACCAGTGGGAGCAATGCAACGCCATCACT 12313
||| ||| |||| || || |||||| ||| || ||| || | || ||| | ||
Sbjct 548 GCCATATAAGCTCGAGGGACTGGAAGCGTCATCCGATGGCAGTAGCGCCCAGCCGACGCT 489
Query 12314 GACGGTTGCGAACATCGAAAGCTCTATTTCTGCCATGTGTCTTGCGTATGACGATCTGCT 12373
|| ||||| ||||| || |||||||| |||| | ||||| || ||||||||| ||||
Sbjct 488 CACCGTTGCCAACATTGACAGCTCTATCACTGCGCTCTGTCTGGCCTATGACGATATGCT 429
Query 12374 GCAGGCGAAAGTCACTATTCACGACACAAAAGAGAAATATCTCGATGCCAGAAATTTCGC 12433
|||||| ||||| || ||||| ||||| | | | || || ||||| | |||||| |
Sbjct 428 GCAGGCCAAAGTTACGATTCATGACACTTTTGCGCATTACCTGGATGCGCGCAATTTCCC 369
Query 12434 GGACGGCAACCCCACAGCAGACCCGACTCAGGAAAAGCTGCAGGTCTGGTATATCGACGG 12493
||| || || || |||||||| || |||| | || ||| | |||||||||||
Sbjct 368 GGATGGAAATCCAACAGCAGATCCCTTGCAGGTGAGAAAGCGGGTTTTCTATATCGACGG 309
Query 12494 GAAAACTGGCGAGCTTGCCGGTGAAACCGTTGAATTTGTTCTGTCCAGCCCGATGGACCT 12553
|||| | |||||||| ||||||||| | || |||||||| | ||||||||||| ||
Sbjct 308 TAAAAATAGCGAGCTTCCCGGTGAAAGTATCGAGTTTGTTCTTACAAGCCCGATGGATCT 249
Query 12554 GCAGGGGCAAATGATCCCGACGCGACAGCTTCATTCCCTGTGTACCTGGTGCATCCGGAA 12613
|||||| ||||| ||||| ||||| | |||||||| || || ||||||||||||||
Sbjct 248 GCAGGGATTGATGATTCCGACCAGACAGTTGCATTCCCTTTGCACATGGTGCATCCGGAA 189
Query 12614 TAAATATCGTACCGGCGACGGCTGCGACTATGCCGGCATCCGCTATTTCGATAAAAACAA 12673
|| || || |||||||| || ||||| |||||||||| | || ||||| | ||||||
Sbjct 188 TAGGTACCGCACCGGCGATGGGTGCGATTATGCCGGCACGCTTTACTTCGACAGAAACAA 129
Query 12674 CAACCCGGTAAGCGATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACT 12733
||| |||||||||||||| || ||||||||||||| |||||||| || |||||||| ||
Sbjct 128 CAATCCGGTAAGCGATCCCTCATTGGATGAATGCAACGGCACGCTCACCGCCTGCAAGCT 69
Query 12734 CCGATTCGGCGAAAATAACGAACTCTCGTTTGGTGGCTTCCCGGGCACGTCTTTGATCAG 12793
|| || || ||| | || ||||| | || ||||| || || || || |||||||||||
Sbjct 68 TCGGTTTGGTGAACACAATGAACTTCCTTTCGGTGGTTTTCCAGGAACATCTTTGATCAG 9
Query 12794 GAGTT 12798
|||||
Sbjct 8 GAGTT 4
Score = 156 bits (172), Expect = 1e-33
Identities = 313/469 (67%), Gaps = 24/469 (5%)
Strand=Plus/Minus
Query 37025 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTTTGCCTGTCA 37084
|||||| || | |||||||| |||| |||| | ||||||||| | | || | || |
Sbjct 18254 ATGAGCTGATTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCT 18195
Query 37085 TGGGCTGTTAATCATTACCGTGATAACGCCATCGCCTACAAAGAGCAGCGCGACAAAGCC 37144
||||| |||| || || || || ||||||||| ||||||||||||||||||| ||||||
Sbjct 18194 TGGGCGATTAACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCC 18135
Query 37145 GCAT---------------------CCATCATCGCTGACATGCAGAAGCGTCAACGTGAT 37183
| ||| |||| |||||||||| || || ||||||
Sbjct 18134 ACTGAGAAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGAT 18075
Query 37184 GTAGCAGAACTTGACGCCAGATACACAAAGGAGCTTGCTGATGCTAACGCGACTATCGAA 37243
| || | || || |||| |||||| || | |||||||| || | | || ||
Sbjct 18074 GCCGCTGCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAG 18015
Query 37244 AGTCTCCGTGCTGATGTTTCTGCTGGTCGTAAGCGCCTGCAAGTCTCTGCCACCTGT--- 37300
|||| | | ||||| |||||| |||||||| ||||| || || | ||||
Sbjct 18014 CGTCTGCATAGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACTGTCCC 17955
Query 37301 GCAAAGTCAACGACCGGAGCCAGCAGCATGGGCGATGGAGAAAGTCCAAGACTTACAGCA 37360
|| || | ||||||| || || |||||||||||| | || |||||||| |
Sbjct 17954 GCGAACGGAGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGAC 17895
Query 37361 GATGCTGAACTCAATTATTACCGTCTCCGAAGTGGAATCGACAGGATAACCGCGCAGGTT 37420
||||||| |||||| | ||| ||| |||||| || | || ||||||
Sbjct 17894 TCCGCTGAACGGGATTATTTCATCCTCAGAAAGCGAATCGTCACAGTGACGAAGCAGGTC 17835
Query 37421 AACTACCTGCAGGAGTACATCAGGACTCAGTGCCTGAAATAAttttttt 37469
||| |||||| | ||||| || ||||||||| | |||||| |||||
Sbjct 17834 GGCTATCTGCAGAACTACATAAGCACTCAGTGCTTAAAATAAAGTTTTT 17786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127018093980632
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