Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_002484.2
Length=56426
Score E
Sequences producing significant alignments: (Bits) Value
seq960 118 4e-22
>seq960
Length=33163
Score = 118 bits (130), Expect = 4e-22
Identities = 281/419 (67%), Gaps = 17/419 (4%)
Strand=Plus/Plus
Query 10162 TGGAGGTCGAGTGCGCTACCGCGTTCAACCCCGGTGGCAACCCTGCCGACCAGATCGAAA 10221
|||| |||||| || || | ||| | ||||| ||| |||||||| ||||||||
Sbjct 2332 TGGAAGTCGAGCACGTCACTTCCTTCGAGCCCGGCGGCGCGCCTGCCGAGCAGATCGAGG 2391
Query 10222 CCACATGCCTTAGCGAAACTGTTCGGCGCTACCTGCGCGGCCTGCGCACGCCGGG-ACAG 10280
||| ||| || | || ||||| | ||||||||||| || || || |
Sbjct 2392 ACACCACCCTCGACGCCCAGGAGCGCAGCTACAAGAAAGGCCTGCGCACCCCTGGCACTG 2451
Query 10281 GCGTCGCTGACCCTCAACGCTGACCCGCGCAACAGTTCCCATATCCGCCTCTACCAACTG 10340
| | ||| |||||||| |||||| |||| |||| | ||||| |||| |||
Sbjct 2452 CCAGC-CTGGGGCTCAACGCCGACCCGGCCAACGCCAGCCATGTGCGCCTGCACCAGCTG 2510
Query 10341 TCCGAGTCCGACGACCAGATCGATCAGGACATCGCTTTCGCGGTTGGCTGGTCTGACGGT 10400
||||| || | | | ||| | || |||| | | || |||||||| |||||
Sbjct 2511 TCCGAAGCCAATGGCGAGACC----AG--CATCAAGTGGGTCGTGGGCTGGTCCGACGGC 2564
Query 10401 ATTGGCGTTGCACCAACCGAGGCACAGGACAGCAACGGTGATTGGGATTTCGTTCTTCCG 10460
| ||| | || || |||| || ||| ||| || ||| | |||| || |||
Sbjct 2565 AAGGGCATCGCGCCGACCGT----CA--ACACCAAGGGCGATA---ACTTCGAGCTGCCG 2615
Query 10461 CCGACGCGCACCTGGTTCGTCTTCCGCGGCTATGTGAGCGACTTCCCGTTCGATTTTGCA 10520
| || |||||||||||| |||| |||||| || |||||||||||| | || ||
Sbjct 2616 ACCACTCGCACCTGGTTCACCTTCGACGGCTACGTCTCGGACTTCCCGTTCAACTTCGCC 2675
Query 10521 GCCAACGCTGTGGTGACCTCTACCGCAACCATTCAGCGCTCCGGCGGTTCCGCCTGGAT 10579
|||||| ||||| ||| | |||| ||||| |||||| |||| || ||| |||||||
Sbjct 2676 CTCAACGCCGTGGTCACCACCACCGTGACCATCCAGCGCACCGGTGGCTCCACCTGGAT 2734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180437755917264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |