Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq960 118 4e-22 >seq960 Length=33163 Score = 118 bits (130), Expect = 4e-22 Identities = 281/419 (67%), Gaps = 17/419 (4%) Strand=Plus/Plus Query 10162 TGGAGGTCGAGTGCGCTACCGCGTTCAACCCCGGTGGCAACCCTGCCGACCAGATCGAAA 10221 |||| |||||| || || | ||| | ||||| ||| |||||||| |||||||| Sbjct 2332 TGGAAGTCGAGCACGTCACTTCCTTCGAGCCCGGCGGCGCGCCTGCCGAGCAGATCGAGG 2391 Query 10222 CCACATGCCTTAGCGAAACTGTTCGGCGCTACCTGCGCGGCCTGCGCACGCCGGG-ACAG 10280 ||| ||| || | || ||||| | ||||||||||| || || || | Sbjct 2392 ACACCACCCTCGACGCCCAGGAGCGCAGCTACAAGAAAGGCCTGCGCACCCCTGGCACTG 2451 Query 10281 GCGTCGCTGACCCTCAACGCTGACCCGCGCAACAGTTCCCATATCCGCCTCTACCAACTG 10340 | | ||| |||||||| |||||| |||| |||| | ||||| |||| ||| Sbjct 2452 CCAGC-CTGGGGCTCAACGCCGACCCGGCCAACGCCAGCCATGTGCGCCTGCACCAGCTG 2510 Query 10341 TCCGAGTCCGACGACCAGATCGATCAGGACATCGCTTTCGCGGTTGGCTGGTCTGACGGT 10400 ||||| || | | | ||| | || |||| | | || |||||||| ||||| Sbjct 2511 TCCGAAGCCAATGGCGAGACC----AG--CATCAAGTGGGTCGTGGGCTGGTCCGACGGC 2564 Query 10401 ATTGGCGTTGCACCAACCGAGGCACAGGACAGCAACGGTGATTGGGATTTCGTTCTTCCG 10460 | ||| | || || |||| || ||| ||| || ||| | |||| || ||| Sbjct 2565 AAGGGCATCGCGCCGACCGT----CA--ACACCAAGGGCGATA---ACTTCGAGCTGCCG 2615 Query 10461 CCGACGCGCACCTGGTTCGTCTTCCGCGGCTATGTGAGCGACTTCCCGTTCGATTTTGCA 10520 | || |||||||||||| |||| |||||| || |||||||||||| | || || Sbjct 2616 ACCACTCGCACCTGGTTCACCTTCGACGGCTACGTCTCGGACTTCCCGTTCAACTTCGCC 2675 Query 10521 GCCAACGCTGTGGTGACCTCTACCGCAACCATTCAGCGCTCCGGCGGTTCCGCCTGGAT 10579 |||||| ||||| ||| | |||| ||||| |||||| |||| || ||| ||||||| Sbjct 2676 CTCAACGCCGTGGTCACCACCACCGTGACCATCCAGCGCACCGGTGGCTCCACCTGGAT 2734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180437755917264