Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq197 125 5e-24
seq1030 122 6e-23
>seq197
Length=620651
Score = 125 bits (138), Expect = 5e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | |||||||| ||| | || |||||||| |||||||||||||||
Sbjct 449566 CCACCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 449625
Query 34223 -AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || ||| |||| || | ||||||||| ||||| ||||| |||||||||||| ||
Sbjct 449626 AAGGTG-CGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGCGG 449684
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||| ||||| ||||| ||| | | | || | || | | |||||
Sbjct 449685 GATGCCCTCTTTGTCCTGGATCTTCGCCTTAACGTTCTCGATGGTGTCTGCAGGCTCGAC 449744
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||||||||| || || || || ||||| || ||||||||
Sbjct 449745 CTCCAAAGTGATGGTTTTCCCAGTCAGGGTCTTCACGAATATCTGCAT 449792
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | || |||| ||| | ||| |||||||| ||||||||||| |||
Sbjct 446934 CCACCTCGCAGACGAAGTACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAC 446993
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || ||||||||||| || ||||| || || ||||||||||| ||
Sbjct 446994 AGGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGG 447053
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||| || ||||| | || | || | ||||| | |||||
Sbjct 447054 ATGCCCTCCTTGTCCTGGATC-TTAGCTTTAACATTCTCGATAGTATCGGCTGGCTCGAC 447112
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| ||||| || || ||||| || || || ||||||||
Sbjct 447113 CTCAAGAGTGATAGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCAT 447160
Score = 114 bits (126), Expect = 8e-21
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | || || || || | ||| ||||||||| |||||||||||||||
Sbjct 447162 CCTCCTCGCAGACGCAAAACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAC 447221
Query 34223 -AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || ||| |||| || | |||||||||||| || || | || ||||||||| |||
Sbjct 447222 AAGGTG-CGGCCGTCTTCAAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGG 447280
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| | ||| ||||| ||| || ||||| | || | || | || | | ||| |
Sbjct 447281 AATTCCCTCTTTGTCTTGGATC-TTGGCTTTGACATTCTCGATGGTGTCTGAAGCTTCAA 447339
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| |||||||| ||||| || || |||||||| || ||||||||
Sbjct 447340 CTTCCAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 447388
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| |||||||| | ||| |||| ||| | ||| || ||||| ||||||||||||||
Sbjct 447878 CCTCCGCGCAGACGCAGTACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAT 447937
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||||| || ||||| || || ||||||||||| |||
Sbjct 447938 AGGGTGCGGCCATCTTCTAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGGGGG 447997
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||||| || | || | || | | ||| ||
Sbjct 447998 ATACCCTCCTTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACT 448057
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| || || || ||||| ||||| || ||||||||
Sbjct 448058 TCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 448104
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| |||||||| | || || || || | ||| || ||||| |||||||||||||||
Sbjct 447650 CCTCCGCGCAGACGCAAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 447709
Query 34223 -AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || || | || |||| ||| || || ||||| ||||| ||||| |||||| ||
Sbjct 447710 AAGGTG-CGACCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGG 447768
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | || | || | || | | ||| ||
Sbjct 447769 GATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAAC 447828
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| || || || |||||||| || || ||||||||
Sbjct 447829 TTCCAGGGTGATGGTCTTTCCTGTCAGAGTTTTGACGAAAATCTGCAT 447876
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | |||||||| ||| | || |||||||| ||||||||||| |||
Sbjct 449338 CCACCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 449397
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || |||||||| |||||||| || || | || ||||||||| |||
Sbjct 449398 AGGGTGCGGCCATCCTCCAACTGTTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 449457
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||| ||||| ||||| ||| | || | || | || | | ||| ||
Sbjct 449458 ATTCCCTCTTTGTCTTGGATCTTGGCCTTCACATTCTCAATTGTGTCTGAGGCTTCCACT 449517
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || || || ||||| || || |||||||| || ||||||||
Sbjct 449518 TCCAGGGTAATTGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 449564
Score = 105 bits (116), Expect = 4e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGA-CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
|| ||||| ||||||||||| || || || ||| |||| || | |||||| || |||||
Sbjct 448142 TCCTTCTGGATGTTGTAGTCAGATAAGGTG-CGGCCGTCTTCTAGCTGCTTACCAGCGAA 448200
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| || ||||||||||| || | || |||||||| ||||| ||||| ||
Sbjct 448201 GATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATT 448260
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | || | | |||||| |||| |||||||| ||||| || || ||||||||
Sbjct 448261 CTCGATGGTGTCTGAAGCTTCGACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCAC 448320
Query 34378 AAAGATCTGCAT 34389
|| ||||||||
Sbjct 448321 GAAAATCTGCAT 448332
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
|| || || ||||||||||||||| || || || | || |||| ||| || || |||||
Sbjct 446286 TCCTTTTGGATGTTGTAGTCGGACAAGGTG-CGACCATCCTCCAGCTGTTTACCGGCGAA 446344
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||||| ||||||||||| ||| | | ||||||||| ||||| ||||| ||
Sbjct 446345 GATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTTACATT 446404
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | || | | ||| || |||| |||||||| || || || ||||| |||||
Sbjct 446405 CTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTCAC 446464
Query 34378 AAAGATCTGCAT 34389
|| ||||||||
Sbjct 446465 GAAAATCTGCAT 446476
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGA-CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
|| ||||| ||||||||||| || || || ||| |||| || | |||||| || |||||
Sbjct 446514 TCCTTCTGGATGTTGTAGTCAGATAAGGTG-CGGCCGTCTTCTAGCTGCTTACCAGCGAA 446572
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| || ||||||||||| || | || |||||||| ||||| ||||| ||
Sbjct 446573 GATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATT 446632
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | || | | |||||| || | |||||||| ||||| || || ||||||||
Sbjct 446633 CTCGATGGTGTCTGAAGCTTCGACTTCTAGGGTGATGGTCTTGCCAGTCAGGGTTTTCAC 446692
Query 34378 AAAGATCTGCAT 34389
|| ||||||||
Sbjct 446693 GAAAATCTGCAT 446704
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | || |||| ||| | ||| |||||||| || || ||||| |||
Sbjct 446706 CCACCACGCAGACGCAATACCAAGTGAAGAGTCGACTCTTTCTGGATATTATAGTCTGAC 446765
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| |||| |||| || | || || || ||||| || || |||||||||||| ||
Sbjct 446766 AATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGG 446825
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| ||||| ||| | || | || | || | | ||| ||
Sbjct 446826 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACT 446885
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||| || ||||| || || |||||||| || ||||||||
Sbjct 446886 TCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 446932
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | || |||| ||| | || |||||||| || || ||||| |||
Sbjct 448863 CCACCACGCAGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGAC 448922
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| |||| |||| || | || || || ||||| || || |||||||||||| ||
Sbjct 448923 AATGTACGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGG 448982
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| ||||| ||| | || | || | || | | ||| ||
Sbjct 448983 ATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCCACT 449042
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||| || ||||| || || |||||||| || ||||||||
Sbjct 449043 TCCAGAGTGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 449089
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 34166 CCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC-AG 34224
|| ||||| | || || || || | ||| || ||||| ||||||||||||||| ||
Sbjct 448366 CCACGCAGACGCAAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAAG 448425
Query 34225 CTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCAC 34284
|| || | || || | ||| ||||| ||||| || | || ||||||||| ||| |
Sbjct 448426 GTG-CGACCATCCTCTAGCTGGTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAAT 448484
Query 34285 GCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGT 34343
| ||| ||||| ||| || ||||| | || | || || | | ||| || |
Sbjct 448485 TCCCTCTTTGTCTTGGATC-TTGGCTTTGACATTCTCAATGATGTCTGAAGCTTCAACTT 448543
Query 34344 CCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||| |||||||| || || || ||||| || ||||||||||||||
Sbjct 448544 CCAGAGTGATGGTCTTTCCCGTCAGAGTCTTGACAAAGATCTGCAT 448589
>seq1030
Length=27445
Score = 122 bits (134), Expect = 6e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
||||||| ||||| ||| | ||| ||| ||||| ||||||||||||||||| ||||
Sbjct 2683 AGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTACGG 2742
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
| || |||| ||| || || ||||| || || ||||||||||| ||| | | ||||
Sbjct 2743 CCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGGATACCCTCC 2802
Query 34292 TTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350
||||| ||| || ||||| | || | || | |||| | || || || | ||
Sbjct 2803 TTGTCCTGGATC-TTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCCACCTCAAGGGT 2861
Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||| ||||| || || || ||||| |||||||||||
Sbjct 2862 GATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCAT 2900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323064936232640
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