Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq65 105 6e-18 >seq65 Length=1244346 Score = 105 bits (116), Expect = 6e-18 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || ||||| || || ||||| |||||||| ||||| | ||||||||| || || || Sbjct 630988 ATGTAAGTGTCAATAAGTAATGAGTACATTTCAGAATGTACATTCTCCATGGCGATTTGG 630929 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAG 16624 || || || |||||||||||||| | | ||| ||||| | | |||||||| | | | Sbjct 630928 AATCCGTAGAAGCATCTAGCTTCAGTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGG 630869 Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAT 16682 || || ||||| || ||||| ||| ||||| || || | | ||||| ||||||| Sbjct 630868 TTCTCATTAACAATCCCATCAGAAGCAGCAAAGAATGCCAAGACATGTTTGATAAAAT 630811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462501628168400