Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_002667.1
Length=41834
Score E
Sequences producing significant alignments: (Bits) Value
seq1367 399 6e-107
>seq1367
Length=8089
Score = 399 bits (442), Expect = 6e-107
Identities = 415/544 (76%), Gaps = 0/544 (0%)
Strand=Plus/Plus
Query 38402 AATGAGTTTAGATAATTTCAAAAAGCAAACTATTACATGGGATATGATTAACCAGGCATT 38461
|||||||||||||||||| ||||| | | ||| |||||||| | | || | | ||
Sbjct 6065 AATGAGTTTAGATAATTTTAAAAATAGAGCGATTGTATGGGATACGGTCAATAAAGGCTT 6124
Query 38462 TGAACAGCCTATTCAAATTATGGAGGGAGATGTCAATGCAAGAACGCTACTTCTTAAGAT 38521
||| || |||||||| ||| | || || ||||| || ||||| | |||| ||
Sbjct 6125 CCCACAACCAATTCAAATAATGCAAGGCGACGTCAACGCTAGAACATTGTCAATTAAAAT 6184
Query 38522 AACTGATAATGGTTCTGTACTTGACTTAACAGGTTATTCAGTAAAATTAACCTATCAATA 38581
| ||||||||| | | |||| || || ||| ||||| ||||| | || ||||||||
Sbjct 6185 ACTTGATAATGGAGGCGAAATTGATTTGACTGGTCATTCATTAAAACTTACATATCAATA 6244
Query 38582 TATGTATAAATCTCAATCAGGTTTTATTATGTTGACTCCTAATGATATATCCAAGGGAGA 38641
|| ||| | | ||||||||| ||||| | ||||| | | || | ||||||||
Sbjct 6245 TACTAATAGCAGTAATTCAGGTTTTGTTATGATTCCTCCTGAAAACTTAACTAAGGGAGA 6304
Query 38642 ATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCAAATTTAAT 38701
|| | | |||||||||| || ||||||| | | ||| | || || | || |||||
Sbjct 6305 GTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCGAACTTAAT 6364
Query 38702 ACTTCTAAACGAAAGTTTAGAACAAGTTATTGTCAGTAAGAATTTAACATTTATATCAGA 38761
|||||| || ||| | ||| || ||||| ||||| ||||| | || |||||||||||
Sbjct 6365 ACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTTATATCAGA 6424
Query 38762 TGATTCTACAGTTACAGATTTAGCTCGAGAAGTGAATAATAAGATTGATGATTTTACAAA 38821
| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 6425 TAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 6484
Query 38822 ATTATTATTTGAAAACATGCCACAAGTGTTGCGTAGTGAGTTAGATGATTTAAATGCTCA 38881
||||||||| ||||| ||||||||||| ||||||||||||| |||| ||| |||||||
Sbjct 6485 ATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTACATGCTCA 6544
Query 38882 AACTGAATCAAATAAGAGTAATATTGAGCTTAAAGCAAATTTAGCTGATATGACGAGCTT 38941
|||||||||||| ||||| ||||||||||||||||| ||| | | || ||| | |||
Sbjct 6545 AACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTGAACAACTT 6604
Query 38942 ACAA 38945
||||
Sbjct 6605 ACAA 6608
Score = 84.2 bits (92), Expect = 6e-12
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 39245 AAATCAAGCTGAAACTGATGTCAAAACAGCAATAACAAAGGCTACCGAAGCGCAAGCGAA 39304
||| |||||||||| ||| | ||||| ||||| |||||||||||||||| ||||||||
Sbjct 6707 AAAACAAGCTGAAAGTGAAGCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAA 6766
Query 39305 CAGTTTACCAC 39315
||||||| |||
Sbjct 6767 CAGTTTAACAC 6777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133744350683088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |