Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_002667.1 Length=41834 Score E Sequences producing significant alignments: (Bits) Value seq1367 399 6e-107 >seq1367 Length=8089 Score = 399 bits (442), Expect = 6e-107 Identities = 415/544 (76%), Gaps = 0/544 (0%) Strand=Plus/Plus Query 38402 AATGAGTTTAGATAATTTCAAAAAGCAAACTATTACATGGGATATGATTAACCAGGCATT 38461 |||||||||||||||||| ||||| | | ||| |||||||| | | || | | || Sbjct 6065 AATGAGTTTAGATAATTTTAAAAATAGAGCGATTGTATGGGATACGGTCAATAAAGGCTT 6124 Query 38462 TGAACAGCCTATTCAAATTATGGAGGGAGATGTCAATGCAAGAACGCTACTTCTTAAGAT 38521 ||| || |||||||| ||| | || || ||||| || ||||| | |||| || Sbjct 6125 CCCACAACCAATTCAAATAATGCAAGGCGACGTCAACGCTAGAACATTGTCAATTAAAAT 6184 Query 38522 AACTGATAATGGTTCTGTACTTGACTTAACAGGTTATTCAGTAAAATTAACCTATCAATA 38581 | ||||||||| | | |||| || || ||| ||||| ||||| | || |||||||| Sbjct 6185 ACTTGATAATGGAGGCGAAATTGATTTGACTGGTCATTCATTAAAACTTACATATCAATA 6244 Query 38582 TATGTATAAATCTCAATCAGGTTTTATTATGTTGACTCCTAATGATATATCCAAGGGAGA 38641 || ||| | | ||||||||| ||||| | ||||| | | || | |||||||| Sbjct 6245 TACTAATAGCAGTAATTCAGGTTTTGTTATGATTCCTCCTGAAAACTTAACTAAGGGAGA 6304 Query 38642 ATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCAAATTTAAT 38701 || | | |||||||||| || ||||||| | | ||| | || || | || ||||| Sbjct 6305 GTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCGAACTTAAT 6364 Query 38702 ACTTCTAAACGAAAGTTTAGAACAAGTTATTGTCAGTAAGAATTTAACATTTATATCAGA 38761 |||||| || ||| | ||| || ||||| ||||| ||||| | || ||||||||||| Sbjct 6365 ACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTTATATCAGA 6424 Query 38762 TGATTCTACAGTTACAGATTTAGCTCGAGAAGTGAATAATAAGATTGATGATTTTACAAA 38821 | ||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 6425 TAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 6484 Query 38822 ATTATTATTTGAAAACATGCCACAAGTGTTGCGTAGTGAGTTAGATGATTTAAATGCTCA 38881 ||||||||| ||||| ||||||||||| ||||||||||||| |||| ||| ||||||| Sbjct 6485 ATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTACATGCTCA 6544 Query 38882 AACTGAATCAAATAAGAGTAATATTGAGCTTAAAGCAAATTTAGCTGATATGACGAGCTT 38941 |||||||||||| ||||| ||||||||||||||||| ||| | | || ||| | ||| Sbjct 6545 AACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTGAACAACTT 6604 Query 38942 ACAA 38945 |||| Sbjct 6605 ACAA 6608 Score = 84.2 bits (92), Expect = 6e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 39245 AAATCAAGCTGAAACTGATGTCAAAACAGCAATAACAAAGGCTACCGAAGCGCAAGCGAA 39304 ||| |||||||||| ||| | ||||| ||||| |||||||||||||||| |||||||| Sbjct 6707 AAAACAAGCTGAAAGTGAAGCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAA 6766 Query 39305 CAGTTTACCAC 39315 ||||||| ||| Sbjct 6767 CAGTTTAACAC 6777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133744350683088