Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_002703.1
Length=38347
Score E
Sequences producing significant alignments: (Bits) Value
seq1367 471 1e-128
>seq1367
Length=8089
Score = 471 bits (522), Expect = 1e-128
Identities = 431/544 (79%), Gaps = 0/544 (0%)
Strand=Plus/Plus
Query 34249 AATGAGTTTAGATAATTTCAAAAAGCAAACTATTACATGGGATATGATTAACCAGGCATT 34308
|||||||||||||||||| ||||| | | ||| |||||||| | | || | | ||
Sbjct 6065 AATGAGTTTAGATAATTTTAAAAATAGAGCGATTGTATGGGATACGGTCAATAAAGGCTT 6124
Query 34309 TGAACAGCCCATTCAAATTATGGAGGGAGATGTCAATGCAAGAACGCTACTTCTTAAGAT 34368
||| || |||||||| ||| | || || ||||| || ||||| | |||| ||
Sbjct 6125 CCCACAACCAATTCAAATAATGCAAGGCGACGTCAACGCTAGAACATTGTCAATTAAAAT 6184
Query 34369 AACTGATAATGGTTCTGTACTTGACTTAACAGGTTATTCAGTAAAATTAACCTATCAATA 34428
| ||||||||| | | |||| || || ||| ||||| ||||| | || ||||||||
Sbjct 6185 ACTTGATAATGGAGGCGAAATTGATTTGACTGGTCATTCATTAAAACTTACATATCAATA 6244
Query 34429 TATGTATAAATATCAATCAGGTTTTATTATGTTAACTCCTAATGATATATCCAAGGGAGA 34488
|| ||| | | ||||||||| ||||| | ||||| | | || | ||||||||
Sbjct 6245 TACTAATAGCAGTAATTCAGGTTTTGTTATGATTCCTCCTGAAAACTTAACTAAGGGAGA 6304
Query 34489 ATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCAAATTTAAT 34548
|| | | |||||||||| || ||||||| | | ||| | || || | || |||||
Sbjct 6305 GTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCGAACTTAAT 6364
Query 34549 ACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGTAAGAATCTTACATTTATATCAGA 34608
|||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct 6365 ACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTTATATCAGA 6424
Query 34609 TGATTCTACAGTTACAAGTTTAACTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 34668
| ||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 6425 TAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 6484
Query 34669 ATTATTATTGGAAAATATGCCACAGGTTATGCGTAGTGAGTTGAATGATTTACATGCTCA 34728
|||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct 6485 ATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTACATGCTCA 6544
Query 34729 AACTGATTCAAACAAGAGCAATATTGAGCTTAAAGCAAATTTAGCTGATATGACGAGCTT 34788
|||||| ||||||||||||||||||||||||||||| ||| | | || ||| | |||
Sbjct 6545 AACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTGAACAACTT 6604
Query 34789 ACAA 34792
||||
Sbjct 6605 ACAA 6608
Score = 176 bits (194), Expect = 1e-39
Identities = 106/112 (95%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 35210 TTAAGTACAAATCAAAATGTCGCAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAA 35269
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 6666 TTAATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAA 6725
Query 35270 GCCAAAAATGCAATGGCAAAGGCTACCAAAGCACAAGCGAACAGTTTACCAC 35321
||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 6726 GCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 6777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122586188398852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |