Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq997 147 5e-31 >seq997 Length=29618 Score = 147 bits (162), Expect = 5e-31 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 17319 ATGAGCAGGGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTTTGCCTGTCA 17378 |||||| | | |||||||| |||| |||| | ||||||||| | | || | || | Sbjct 18254 ATGAGCTGATTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCT 18195 Query 17379 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGAGCAGCGCGACAAAAAC 17438 ||||| |||| || || || || |||||||| |||||||||||||||||||| ||| | Sbjct 18194 TGGGCGATTAACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCC 18135 Query 17439 ACCAGAGAA-CTGAAGCTGGCGAACGCCACCATTACTGACATGCAACAGCGCCAGCTTGA 17497 || ||||| || | | ||| ||||||||||| | |||||||| ||||||| ||| Sbjct 18134 ACT-GAGAAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGA 18076 Query 17498 TGCTGATGCACTCGATGCTAAATACACGAAGGAGTTAGCTGATGCGAAAG 17547 ||| | ||| || ||||| |||||||| || ||||||||||||| Sbjct 18075 TGCCGCTGCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAG 18026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122426191807452