Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_002747.1 Length=37667 Score E Sequences producing significant alignments: (Bits) Value seq1367 426 4e-115 >seq1367 Length=8089 Score = 426 bits (472), Expect = 4e-115 Identities = 421/544 (77%), Gaps = 0/544 (0%) Strand=Plus/Plus Query 31146 AATGAGTTTAGATAATTTCAAAAAGCAAACTATTACATGGGATATGATTAACCAGGCATT 31205 |||||||||||||||||| ||||| | | ||| |||||||| | | || | | || Sbjct 6065 AATGAGTTTAGATAATTTTAAAAATAGAGCGATTGTATGGGATACGGTCAATAAAGGCTT 6124 Query 31206 TGAACAGCCCATTCAAATTATGGAGGGAGATGTCAATGCAAGAACGCTACTTCTTAAGAT 31265 ||| || |||||||| ||| | || || ||||| || ||||| | |||| || Sbjct 6125 CCCACAACCAATTCAAATAATGCAAGGCGACGTCAACGCTAGAACATTGTCAATTAAAAT 6184 Query 31266 AACTGATAATGGTTCTGTACTTGACTTAACAGGTTATTCAGTAAAATTAACCTATCAATA 31325 | ||||||||| | | |||| || || ||| ||||| ||||| | || |||||||| Sbjct 6185 ACTTGATAATGGAGGCGAAATTGATTTGACTGGTCATTCATTAAAACTTACATATCAATA 6244 Query 31326 TATGTATAAATCTCAATCAGGTTTTATTATGTTAACTCCTAATGATATATCCAAGGGAGA 31385 || ||| | | ||||||||| ||||| | ||||| | | || | |||||||| Sbjct 6245 TACTAATAGCAGTAATTCAGGTTTTGTTATGATTCCTCCTGAAAACTTAACTAAGGGAGA 6304 Query 31386 ATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCAAATTTAAT 31445 || | | |||||||||| || ||||||| | | ||| | || || | || ||||| Sbjct 6305 GTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCGAACTTAAT 6364 Query 31446 ACTTCTCAATGAAGATAAAGAGCAGGTTATTGTCAGTAAGAATTTAACATTTATATCAGA 31505 |||||||||||||||||||||||||||||| ||||| ||||| | || ||||||||||| Sbjct 6365 ACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTTATATCAGA 6424 Query 31506 TAATTCTACAGTTACAGATTTAGCTCAAGAAGTGAATAATAAGATTGATGATTTTACAAA 31565 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 6425 TAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 6484 Query 31566 ATTATTATTAGGAAAAATGCCACAAGTTTTGCGTAGTGAGTTGAATGATTTACAGGCTAA 31625 ||||||||| | ||| ||||||||||| ||||||||||||||||||| ||||| ||| | Sbjct 6485 ATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTACATGCTCA 6544 Query 31626 AACTGATTCAAATGCGAGCAATATTGAACTAAAAGCAAATTTAGCTGATATGACAAGCTT 31685 |||||| ||||| |||||||||||| || ||||| ||| | | || ||| | ||| Sbjct 6545 AACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTGAACAACTT 6604 Query 31686 ACAA 31689 |||| Sbjct 6605 ACAA 6608 Score = 190 bits (210), Expect = 5e-44 Identities = 108/110 (98%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 32040 AATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 32099 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6668 AATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 6727 Query 32100 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCAC 32149 |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 6728 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 6777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120410234755812