Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq197 136 3e-27
seq1030 129 5e-25
seq637 102 6e-17
>seq197
Length=620651
Score = 136 bits (150), Expect = 3e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
|||||||||||| || ||| |||||| || |||||||||||| || |||| | ||
Sbjct 446264 TAATACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATC 446323
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
||||| ||||| |||||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 446324 CTCCAGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTC 446383
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
| || || ||| || | | | | ||||| | | || || |||| || || ||
Sbjct 446384 CTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTGATGGT 446443
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| ||||||||||||||||| || || |||||
Sbjct 446444 CTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 446476
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186
||||||||| || ||| |||||||||||||||||||||| || ||| | || ||
Sbjct 447895 TACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCTTC 447954
Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246
||||| || || ||||| |||| ||||| ||||| || || | |||||||||||||
Sbjct 447955 TAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTG 448014
Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
|| || ||| || | | | | ||||| | | || || |||| || || |||||
Sbjct 448015 GATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTGATGGTCTT 448074
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||||||||||||||| || || |||||
Sbjct 448075 TCCCGTCAGAGTCTTCACGAAAATCTGCAT 448104
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||||| || | | ||||||||||| ||| ||| ||||| |||||||||||| |
Sbjct 449566 CCACCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 449625
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| ||| |||| || || || || || ||||| || | ||||| |||||||| ||
Sbjct 449626 AAGGTGCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGCGGG 449685
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||| |||||| || || |||||| | | | | |||| || ||| |||
Sbjct 449686 ATGCCCTCTTTGTCCTGGATCTTCGCCTTAACGTTCTCGATGGTGTCTGCAGGCTCGACC 449745
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|||| || || || || || ||||| |||||||| || || |||||||||
Sbjct 449746 TCCAAAGTGATGGTTTTCCCAGTCAGGGTCTTCACGAATATCTGCATGTTG 449796
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||||||||||||||||||| || |||| | || ||||| ||||| || |||||
Sbjct 447685 CTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCCAGCTGTTTACCAGCGAA 447744
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||||||||||||||| | ||||||||||| || || ||| ||
Sbjct 447745 GATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATT 447804
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | |||| | | || || |||| ||| || ||||| || |||||||| || ||
Sbjct 447805 CTCGATGGTGTCTGAAGCTTCAACTTCCAGGGTGATGGTCTTTCCTGTCAGAGTTTTGAC 447864
Query 45325 AAAGATTTGCAT 45336
|| || |||||
Sbjct 447865 GAAAATCTGCAT 447876
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||||||||||||||||||| || |||| | || || || || || ||||||||
Sbjct 448398 CTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCTAGCTGGTTGCCGGCGAA 448457
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| ||| ||||| || || | ||||| ||||| || || || ||
Sbjct 448458 GATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTGACATT 448517
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | |||| | | || || |||| || || ||||| |||||||||||||| ||
Sbjct 448518 CTCAATGATGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTGAC 448577
Query 45325 AAAGATTTGCAT 45336
|||||| |||||
Sbjct 448578 AAAGATCTGCAT 448589
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
||||||||||| || || ||| ||||| || || ||||| || | || ||||
Sbjct 448878 AATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGGCCGTCT 448937
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| |||||||| |||||||| || | ||||| ||||||||||| | || ||||||||
Sbjct 448938 TCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCT 448997
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|| || ||| || | | | | |||| | | ||||| |||| || || |||
Sbjct 448998 TGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCCACTTCCAGAGTGATTGTC 449057
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || || || ||||| || || |||||
Sbjct 449058 TTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 449089
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
||||||||||| || || ||| ||||| || || ||||| || | || ||||
Sbjct 446721 AATACCAAGTGAAGAGTCGACTCTTTCTGGATATTATAGTCTGACAATGTACGGCCGTCT 446780
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| |||||||| |||||||| || | ||||| ||||||||||| | || ||||||||
Sbjct 446781 TCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCT 446840
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|| || ||| || | | | | |||| | | || || |||| || || |||
Sbjct 446841 TGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGAGTGATTGTC 446900
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || || || ||||| || || |||||
Sbjct 446901 TTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 446932
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||||| || | | ||||||||| || ||| ||| ||||||||||||||||| |
Sbjct 446934 CCACCTCGCAGACGAAGTACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAC 446993
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || |||| || || || ||||| |||| ||||| ||||| |||||
Sbjct 446994 AGGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGG 447053
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||||||| || || ||||| | | | | || | ||| |||
Sbjct 447054 ATGCCCTCCTTGTCCTGGATCTTAGCTTTAACATTCTCGATAGTATCGGCTGGCTCGACC 447113
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | || || || || || || |||||||| || || || |||||
Sbjct 447114 TCAAGAGTGATAGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCAT 447160
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203
||||||||| ||||||||||| | | || | ||| |||| || || || || || ||||
Sbjct 448141 CTCCTTCTGGATGTTGTAGTCAGATAAGGT-GCGGCCGTCTTCTAGCTGCTTACCAGCGA 448199
Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263
| |||| ||||| ||||| ||||| | || |||||||| || || ||| ||
Sbjct 448200 AGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTTACAT 448259
Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | | |||| | | || || |||| ||| || |||||||| ||||| || ||||
Sbjct 448260 TCTCGATGGTGTCTGAAGCTTCGACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCA 448319
Query 45324 CAAAGATTTGCAT 45336
| || || |||||
Sbjct 448320 CGAAAATCTGCAT 448332
Score = 89.7 bits (98), Expect = 4e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203
||||||||| ||||||||||| | | || | ||| |||| || || || || || ||||
Sbjct 446513 CTCCTTCTGGATGTTGTAGTCAGATAAGGT-GCGGCCGTCTTCTAGCTGCTTACCAGCGA 446571
Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263
| |||| ||||| ||||| ||||| | || |||||||| || || ||| ||
Sbjct 446572 AGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTTACAT 446631
Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | | |||| | | || || || | ||| || |||||||| ||||| || ||||
Sbjct 446632 TCTCGATGGTGTCTGAAGCTTCGACTTCTAGGGTGATGGTCTTGCCAGTCAGGGTTTTCA 446691
Query 45324 CAAAGATTTGCAT 45336
| || || |||||
Sbjct 446692 CGAAAATCTGCAT 446704
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/119 (77%), Gaps = 2/119 (2%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTC 45183
||||||||||| || ||| || ||||| ||||||||||| | | || | |||| | ||
Sbjct 448606 AATACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGATAAGGT-GCGACCATC 448664
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGT 45242
|| || ||||| |||||||| ||||||| ||| ||||| || || | ||||| ||||
Sbjct 448665 CTCTAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGT 448723
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
||||||||||| || || ||| ||||| || || ||||| || | || ||||
Sbjct 447405 AATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGGCCGTCT 447464
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| |||||||| |||||||| || | ||||| ||||||||||| | |||||||||||
Sbjct 447465 TCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC 447523
>seq1030
Length=27445
Score = 129 bits (142), Expect = 5e-25
Identities = 173/240 (72%), Gaps = 3/240 (1%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| ||||| | || || |||||||| || || |||||||| |||||||||||| |
Sbjct 2674 CCTCCTCTAAGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 2733
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || | || ||||| ||||| || ||||| |||| ||||| ||||| || ||
Sbjct 2734 AGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGG 2793
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||||||||||| || || || || | | | |||| | ||||||||
Sbjct 2794 ATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCCACC 2853
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCA---TGTTGCCTCAA 45346
|| | ||| || ||||||||||| || |||||||| ||||| |||| |||||||| ||
Sbjct 2854 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCATATTGTTGCCTGAA 2913
>seq637
Length=122170
Score = 102 bits (112), Expect = 6e-17
Identities = 275/409 (67%), Gaps = 10/409 (2%)
Strand=Plus/Minus
Query 6380 TAGTCCACCACACCCTCCTCCCAAGTGCCTTTCACTTTACCCGTCGCCACCCCACTAAAC 6439
||||| ||||| ||| ||||| || ||| |||| |||| ||||| || | |||
Sbjct 60373 TAGTCAACCACGCCCGGTTCCCAGGTACCTCTCACCATACCGGTCGCGGTACCGGTGAAC 60314
Query 6440 AGATTGTTGTTCGTGTAATTCGTC-ACACCCGACCACCCCCTGCCGTACATAGCCACCCC 6498
||||||| ||||| ||| || |||| ||| || | ||| ||||| || | ||
Sbjct 60313 GGATTGTTACCGGTGTAGC-CGTGTACCCCCGTCCAGCCGCGGCCATACATGCCCGCACC 60255
Query 6499 CACCACCAACTTGCCA--CTGTTCACACTCTGGTTCAACAAACGCCTCAACGCAAAGT-C 6555
||||| | ||||||| |||| | | || || | || || || ||||| | | |
Sbjct 60254 GACCACGATCTTGCCAGGCTGTACGC-CT-TGCTGCAGCAGG-GCATCAACCCCGTTTTC 60198
Query 6556 TGTGGTGTAGTTTTCGTGGGTTTTCCACGACGGTGGATACAGAGGTGCGTGGTAGCCCAG 6615
||||||||||| || | | ||| | || | || ||| | || |||| ||||||
Sbjct 60197 CGTGGTGTAGTTGGTGTCTGGTCGCCATGCTGGCGCATGCAGCGCAGCCTGGTGGCCCAG 60138
Query 6616 ATCCGTCATCGACCACGCACCCTTGTAATCGTAGTTCATCACGAAAATGTAGTCGAGATA 6675
|| || | ||| | || | | | |||||| |||||| ||| |||| |||||| ||
Sbjct 60137 CTCGGTGTTGCTCCAGCCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGGTCGAGGTA 60078
Query 6676 CTGTTG-GCACTGTTTGTAGTCGACCACGTCTATCTTGTCGTAACCACCGCTGATGGCGC 6734
||| || ||| || ||||||| || | || ||||| || | ||| | | ||| ||||
Sbjct 60077 CTGCTGAGCAGTG-GTGTAGTCCACGTCTTCAATCTTATCTTTACCCGCACCGATTGCGC 60019
Query 6735 TCGTCAACTGCAATCTCCGGCCCGTCTTCTCCTCCAGCTCGTCCAACAT 6783
| |||| || | | ||||| |||| | |||||||| || |||
Sbjct 60018 TGGTCAGCTCATAGGTACGGCCAGTCTGGGCAGACAGCTCGTTCAGCAT 59970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395066561927674
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