Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq486 91.5 3e-13 >seq486 Length=217039 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 93570 GTTCACCACTTGGAATGATCCTGAAAGTACATTACGATTATACATGTTGGACGTTAAAGG 93629 ||| ||||| |||||| ||| ||||| || | | | || ||||| || || || || Sbjct 175103 GTTGACCACCTGGAATTCTCCAGAAAGAACTCTTCTTTGGTAAATGTTTGAAGTGAATGG 175162 Query 93630 CTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGATGCAGTAGGCATGGGAGCAAC 93689 |||||| |||||| |||||| || |||||||||||||| || || |||||||| || | Sbjct 175163 CTCAAATGATTCATTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGGCATGGGGGCCAG 175222 Query 93690 AAACA 93694 |||| Sbjct 175223 CAACA 175227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989561253793270