Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_003278.1
Length=35580
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 383 4e-102
>seq1001
Length=29257
Score = 383 bits (424), Expect = 4e-102
Identities = 1152/1772 (65%), Gaps = 95/1772 (5%)
Strand=Plus/Plus
Query 16979 TATCATCACGGTGTCCGGGTCCAAGAGATCAATGACGGGACCCGCCCCATTCGCACCATC 17038
||||||||||| ||| |||| ||||| || || || || ||| ||||| |||| |
Sbjct 6707 TATCATCACGGCGTCGAGGTCATCGAGATTAACGATGGCACGCGCACCATTTCCACCGTT 6766
Query 17039 GCCACCGCGATCATCGGCCTGGTAGCCACCGCCGAAGACGCCGACGCCACCGCCTTTCCA 17098
| || || ||||||||| |||| ||| ||| || || ||||| | | | ||||
Sbjct 6767 TCGACGGCCATCATCGGCATGGTCTGCACGGCCAGCGATGCTGACGCAAA-GACATTCCC 6825
Query 17099 CTCGATACG--CCGGTACTCATCACCAACGTGCAGGCTGCCATCGGCAAGGCGGGCACCA 17156
|| | ||| |||||||| || | || |||||| | || ||||| || || || | |
Sbjct 6826 CTTAA-ACGAGCCGGTACTGATTAACAGCGTGCAAACGGCTATCGGTAAAGCCGGTAAAA 6884
Query 17157 GCGGTACGCTGCCCGCAAGCCTGCAAGCAATCGCCGACCAGGCCAACGCCGCCACTGTGG 17216
|| |||||| | | |||||| || |||||||||||| ||| | | || |||||
Sbjct 6885 AAGGCACGCTGGCAAAATCCCTGCAGGCCATCGCCGACCAGTGCAAACCGGTCATTGTGG 6944
Query 17217 TGGTGCGGGT----GAAG-----------CCGGGCGAGGATGAAGCCGCG---------A 17252
||||||| || |||| |||| || ||||| ||| |
Sbjct 6945 TGGTGCGCGTTCCAGAAGGTGTCGACGACCCGGCAGACCCGGAAGCGGCGCAGAAAGAAA 7004
Query 17253 CCAATAGCGCGGTCATCGGCGGCGTCAG-CGCCGATGGCAAGTACACCGGCATGAAGGCC 17311
||| | | |||||||| || | | || | ||||| |||||||| |||| ||
Sbjct 7005 CCATTTCCAACATCATCGGCA-CGACCGACGAAAACGGCAAATACACCGGGCTGAAAGCG 7063
Query 17312 TTGCTTGCCGCCAAGGCCCGCTTGGGCGTGGTACCGCGCATCCTCGGCGTGCCGGGCCTG 17371
|| | | || || || | ||||| |||||||| |||||||||||||| |||
Sbjct 7064 CTGTTAACGGCGAAAACCGTCACCGGCGTTAAGCCGCGCATTCTCGGCGTGCCGGGGCTG 7123
Query 17372 GATACCCAGCCGGTCGCTACCGCACTCATCGCCATCGCCCAGCAACTGCGCGCCTTCGCT 17431
||||| ||| || || ||||| || | | | |||| |||||||| ||||
Sbjct 7124 GATACGCAGGAAGTGGCGACCGCGCTTGCGTCAACCTGCCAGAGCCTGCGCGCGTTCGGC 7183
Query 17432 TATGTCTCCGCCAGCGGCTGCAAGACAAAGGAAGAGGCCACCGCCTACCGCGAGAACTTC 17491
|| || ||| | ||||||||||| | || |||| | ||||| ||||| |||
Sbjct 7184 TACGTAAGCGCGTGGGGCTGCAAGACCATTTCCGACGCCATCAAATACCGTGAGAATTTC 7243
Query 17492 GCCGCGCGCGAAGCCATGGTGATCTGGCCGGACTTCCTGACGTGGAGCACCGTGGTCAAC 17551
| |||||| ||||| || || ||||| ||| | ||| |||| || |||
Sbjct 7244 AGCCAGCGCGAGCTGATGGTCATTCACCCTGACTTTCTGGCATGGGACACCACGGCGAAC 7303
Query 17552 CAGACCG----TGCCTGCGCCAGCTGTTGCCCAGGCACTGGGCTTGCGTGCCCGGATCGA 17607
| |||| ||| || || | | |||| || || ||| |||| ||| |||||
Sbjct 7304 GAAACCGATATTGCATGGGCGACC----GCCCGCGCGCTCGGCCTGCGCGCCAAAATCGA 7359
Query 17608 TCAGGAGGTCGGTTGGCACAAGACCCTGTCGAACGTCGCCGTCAACGGCGTGACCGGCAT 17667
|||||| ||| |||||||| || ||||| ||||| | ||| || ||||| |||||| |
Sbjct 7360 CCAGGAGACCGGATGGCACAAAACGCTGTCTAACGTTGGCGTGAATGGCGTCACCGGCGT 7419
Query 17668 CAGCGCCGACGTGTTCTGGGACCTGCAGAGCCCCAGC-ACCGACGCCAACTACCTCAACG 17726
||||||| || | ||||| ||||| | | || |||||||||||| || ||
Sbjct 7420 CAGCGCCTCGGTCTCATGGGATTTGCAG-GAGCAGGCTACCGACGCCAACCTGCTGAATC 7478
Query 17727 AGAACGAGGTCACCACCCTGGTGCAGGAAGGGGGATTCCGTTTCTGGGGTTCGCGCACCT 17786
|| || ||| || || || | | | | || || |||||||| || ||||
Sbjct 7479 AGGCCGGGGTGACAACGCTAATCCGCAACGACGGCTTTAAGTTCTGGGGCAACCGTACCT 7538
Query 17787 GCAGCGATGATCCGCTGTTCGCCTTCGAGAACTACACCCGCACCGCCCAGGTGCTGGCCG 17846
|| || ||||| | |||| || || |||||||||||||| || |||||||||||||
Sbjct 7539 GCTCGGACGATCCTTTATTCGTGTTTGAAAACTACACCCGCACGGCGCAGGTGCTGGCCG 7598
Query 17847 ACACTATCGCCGAAGCGCACATGTGGGCGGTTGACAAGCCCATGCACCCGTCACTGGTGC 17906
|||| || || || |||||| ||||||| | ||||||||| | | | | || | |
Sbjct 7599 ACACGATGGCGGAGGCGCACGCGTGGGCGATGGACAAGCCCGTTTCCGCAACGCTTATCC 7658
Query 17907 GCGACATCCTTGAGGGCGTGAACGCGAAGTTCCGCGAGCTCAAGGGGCTCGGTCTGATCA 17966
||||||| | | || | || || || ||||||||||| || ||| |||
Sbjct 7659 GCGACATTGTCGCCGGTATCAATGCCAAATTCCGCGAGCTGAAAAATAACGGCTATATCG 7718
Query 17967 TCGAC-GCCCAGGCCTGGTACGACCCCAACGTGAACGACAAGGACACGCTCAAGGCCGGC 18025
| ||| | || | |||||||||||| | ||| | ||| || || || |||||
Sbjct 7719 TTGACGGGTCATG-CTGGTACGACCCGGAGTCAAACACCGTGGAAACCCTGAAAGCCGGG 7777
Query 18026 AAGCTGCGCATCACCTACGACTACACCCCGGTGCCGCCGCTCGAGGACCTGACCTTCTTC 18085
|||||| ||| |||||||||||||| || |||||||| || |||||||| | |
Sbjct 7778 AAGCTGTATATCGATTACGACTACACCCCCGTCCCGCCGCTGGAAAACCTGACCCTGCGC 7837
Query 18086 CAGAAGATCACCGACAGCTATCTCGTCGACTTCGC-CAGCCGCGTCAACGCCTGACGCCC 18144
||| |||||||| | |||||| | ||| | | || || |||||| || |
Sbjct 7838 CAGCGCATCACCGATACCTATCTGGCTGACCTGTCAGAGTCG-GTCAACAGCTAA----- 7891
Query 18145 AGCGCTCCCCGGACGGGGAGCCGACCCACCTGATTCCCGGAGAGCCCTACCATGGCCATG 18204
||||| || || | |||||| |
Sbjct 7892 ----------------GGAGC-------------TC----AG------AACATGGCGTTA 7912
Query 18205 CCGCGCAAGCTCAAGAACATGAACCTCTTCAACGACGGCGGTAGCTACCAGGGCGTCGTG 18264
|| ||||| || || || |||| | || ||||||||| |||||| |||||||||
Sbjct 7913 CCACGCAAACTGAAATACCTGAATATGTTTAACGACGGCCTCAGCTACATGGGCGTCGTT 7972
Query 18265 AAGTCCTGCACCCTGCCCCCGCTGGCCCGCAAGATGGAGGCCTTCCGCGGGGGCGGCATG 18324
| ||| ||||||||| |||| |||||||| | ||| | |||||| ||||| |||
Sbjct 7973 GAATCCGTCACCCTGCCAAAGCTGACCCGCAAGCTTGAGAAATACCGCGGCGGCGGGATG 8032
Query 18325 AACGGCCCGGTCAAGGCCGACCTAGGCTTCGACGATGACGGCATCCAGTTCGAGTGGACC 18384
||| |||| | ||||| || ||||||| |||| | | | ||||||||
Sbjct 8033 CCGGGCTCGGTGTCGATTGACCTCGGTCTCGACGACGACGCGCTGTCGCTTGAGTGGACG 8092
Query 18385 CTCGGCGGCCTGGATCTGAC----AGCCCT-CAAGCAGTACGGCGCAGTCAGTGCCAACG 18439
|| ||||||||| ||||| ||| | |||||||| || ||||| ||
Sbjct 8093 CTGGGCGGCCTG--CCTGACGTCGAGCTGTGGGCGCAGTACGCGTCACCGGGTGCCGACA 8150
Query 18440 GCGTCATGCTGCGCTTCGCCGGCTCATTCCAGCAAGACGATACCGGCGAAGTCACGTCCG 18499
|||| |||||||||| ||||||| ||||||| ||||| ||||||| | | |||
Sbjct 8151 GCGTGCCGCTGCGCTTCACCGGCTCTTTCCAGCGCGACGACACCGGCGCTATTTCCGCCG 8210
Query 18500 TCGAAATCGTCGTTCGCGGCCGGCACGAGACCATCGAAATGGGTGACGCCCAGCCCGGCG 18559
| || | ||| | || ||||| ||| || ||| || || | | | ||||
Sbjct 8211 TTGAGGTGGTCATGCGTGGCCGTCACAAGGAGTACGACGGCGGCGAAAACAAACAGGGCG 8270
Query 18560 AAGACACCGAGCACAAGATCACCACCACCTGCAGCTACTACAAGCTCGTCGTCAACGGCG 18619
|| | | | ||| ||| | ||| ||| ||||| ||||| | |||||
Sbjct 8271 AAAGCGGCACGACCAAAATCTCGACCGAGTGCTCTTACTATCAGCTCACGATTGACGGCA 8330
Query 18620 AGGAAGTCATCGAGATCGACCTGCTGAACTTCGTCGAGAAGGTCAACGGCAAGGACCTGC 18679
|||| ||||||||||| ||| | | ||| | || ||| ||| ||||| |||| |
Sbjct 8331 AGGAGGTCATCGAGATTGACGTCGTCAACATGGTGATGAAAGTCGACGGCGTCGACCGTC 8390
Query 18680 TCGAGGCACAGCGCAAGGCCATCGGCCTGTAA 18711
||| | || ||| ||| || |||||||||
Sbjct 8391 TCGCTGAGCACCGCCGGGCGATTGGCCTGTAA 8422
Score = 140 bits (154), Expect = 7e-29
Identities = 271/389 (70%), Gaps = 12/389 (3%)
Strand=Plus/Plus
Query 12795 CCGGAGGATCAGCAGGCGGAAATCGC-CGCCCGCCTCGCCCTGGAGTCCGAACCGCTGAC 12853
||||| || ||||||| | |||||| ||| ||| | | || |||||||| ||||||
Sbjct 2820 CCGGAAGACCAGCAGGACGCAATCGCGCGCACGC-TGTCGCTTGAGTCCGAGCCGCTGGT 2878
Query 12854 CAAGCTGCTCGAGGAAAACGCATACCGCGAAATGCTCTGGCGCCAGCGGGTCAACGAGGC 12913
|||||||| |||||||||| ||||| ||| | ||||||| ||||| |||||||||||
Sbjct 2879 GAAGCTGCTGCAGGAAAACGCCTACCGGGAAGTTATCTGGCGACAGCGCGTCAACGAGGC 2938
Query 12914 GGCTCTCGCCAACATGCTGGCCAGCGC-CCAGGGCGCTGACCTCGACCAGCTCGCCGCGA 12972
|| | || |||||||||| ||| |||| || ||||| |||||| | | || |
Sbjct 2939 CGCGCGTGCGGTCATGCTGGCCTACGCTGCAGGAAGC-GACCTTGACCAGATAGGCGGAA 2997
Query 12973 ACTACAACGTCAAGCGCCTGGTCATCCAGCCTGGAGATCCGTCGAAGGTGCCGCCCGTGC 13032
| |||||||| ||||||| || ||| |||| ||| ||| | | ||||| ||
Sbjct 2998 ATTACAACGTTGAGCGCCTTGTTATCACCCCTGCAGACGACACGACGTTACCGCCGACGC 3057
Query 13033 CGGAACTGCTGGAGTCCGACGACAGCCT-GCGCGAGCGGGCGCAGATGGCCTGGGAAGGC 13091
| | || ||||||| ||| || | || || ||| ||| ||||| || ||
Sbjct 3058 CTGCCGTGATGGAGTCGGAC-ACCGACTACCGTCTGCGCATTCAGCAGGCCTTTGAGGGG 3116
Query 13092 CTCAGCACCGCGGGACCGCGTAACAGCTAC-ATC--TTCCACGCCCGCGCCGCCGACGGT 13148
|| || ||||| || | || | ||| | ||| || |||| ||| ||| |||||
Sbjct 3117 CTGAGTACCGCAGGCTC---TACCGGCTCCTATCAGTTTCACGGTCGCAGCGCTGACGGG 3173
Query 13149 CGCGTCGGCGATGCCTCGGCCGTCAGCCC 13177
|| |||| |||| |||| | |||| ||
Sbjct 3174 CGGGTCGCCGATATTTCGGTCATCAGTCC 3202
Score = 84.2 bits (92), Expect = 5e-12
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 13705 CTGCCCGGTCGCCCTTCTGCCGTACCTGGCCTGGGCGTTCTCCGTCGATCGCTGGGACAG 13764
|||||||| || ||||||| ||||| |||||||| ||||| || |||||||||
Sbjct 3735 CTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGGCGTTTTCCGTTGACCGCTGGGACGA 3794
Query 13765 CACCTGGCCGGAGCGTGTGAAGCGCCAGGTCATTCGGGATGCCTACCTCGTCCACTCCCA 13824
| |||||||||| ||||| | || || || | || | | |||| | ||
Sbjct 3795 GAACTGGCCGGAGGCCACAAAGCGGGATGTGATCCGCGCGGCGTGGTTTATCCATGCGCA 3854
Query 13825 CAAGGGAACCTTGAGCGCCCTGCGCCGCGTGGTCGAGCCCGTCGGCTCGCTGACCGACAT 13884
||| ||||| | | || ||||||||||||| |||||| |||||| |||| || |
Sbjct 3855 CAAAGGAACGATTGGGGCAGTGCGCCGCGTGGTGGAGCCCCTCGGCTACCTGATTAACGT 3914
Query 13885 CCTCGAGTGGTGGCAA 13900
||||||||| ||
Sbjct 3915 GTCGGAGTGGTGGGAA 3930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113731977030776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |