Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_003356.1
Length=42575
Score E
Sequences producing significant alignments: (Bits) Value
seq960 125 2e-24
>seq960
Length=33163
Score = 125 bits (138), Expect = 2e-24
Identities = 291/429 (68%), Gaps = 10/429 (2%)
Strand=Plus/Plus
Query 30361 AGCGATTCATCATGACAGAGCAGCAGACCCTTTT-ATCTCACGGCGTGGCGACGGCTTAT 30419
|||| |||| | |||| |||| ||| | || | | || ||||| | || || || ||
Sbjct 18282 AGCGTTTCACCCTGACCGAGCGCCAGTCGCTGCTCAACT-ACGGCATCGCCACCGCCTAC 18340
Query 30420 GTGGAAGGCGGC-ACGTTGCGGATCCAGCGTTCCGTAACCACATACAAAAAGAATGCATA 30478
||||||||| |||| ||| ||||||||||| | || || ||| | ||||| || |
Sbjct 18341 TACGAAGGCGGCTACGT-GCGCATCCAGCGTTCGATCACTACCTACCAGAAGAACGCTTT 18399
Query 30479 TGGCGTGGCAGACAACAGCTATCTGGACAGTGAAACACTGCATACCAG--CGCATATGTT 30536
||| ||| |||||| ||| |||||||| || || |||| ||||| || || |
Sbjct 18400 CGGCCAGGCGGACAACTCCTACCTGGACAGCGAGACCCTGC--ACCAGTCGGCCTACATC 18457
Query 30537 CTTCGCAAACTGAAATCGGTCATCACAAGCAAGTACGGACGCCACAAGCTGGCAAATGAT 30596
| ||| ||| || || ||||| ||||||||||| ||||||||| |||| |||
Sbjct 18458 GTGCGCCGCCTGCAAAGCGTGATCACCAGCAAGTACGGGCGCCACAAGTTGGCCGCCGAT 18517
Query 30597 GGTACCCGTTTTGGTCCTGGGCAGGCGATTGTTACTCCTGCCGTTATCAAAGGGGAGCTT 30656
|| ||||| || || | || ||| |||| || || || | || || |||||
Sbjct 18518 GGCACCCGCTTCGGCGCCGGCCAGCCGATCGTCACCCCGAGCACCATTCGCGGCGAGCTG 18577
Query 30657 CTGGCGACATATCGTC-AGATGGAGCGTGCCGGTATTGTGGAAAATTACGATCTGTTTAA 30715
| || || || | || |||||| | || ||||||||| ||| |||||
Sbjct 18578 ATCGC-CCAGTACGCCAAGCTGGAGCTGGAAGGCCATGTGGAAAACGCCGAGCTGTTCGC 18636
Query 30716 ACAGTATCTGATAGTTGAGCGTGATGCGGATAACCCGAACCGACTGAACACGCTGTTCCC 30775
|| | ||| | || || || ||||| |||||||||| | ||| |||||||||
Sbjct 18637 CGAGCACCTGGTGGTGGAACGCGATGCCCGGGACCCGAACCGCATCAACGTGCTGTTCCC 18696
Query 30776 GCCGGATTA 30784
|||||| ||
Sbjct 18697 GCCGGACTA 18705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136115500167636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |