Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq486 221 1e-52
>seq486
Length=217039
Score = 221 bits (244), Expect = 1e-52
Identities = 710/1096 (65%), Gaps = 12/1096 (1%)
Strand=Plus/Plus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
||||| ||||||| ||| | |||| || | || || | | |||||||||||||||
Sbjct 174759 TCAACAGTGAATTGTATTGCATTTACAGCAGGCTTAGTACGTAAATAATACATTCCAGTC 174818
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| | |||| | |||| | || ||||| || |||| |||| | || | || |
Sbjct 174819 TTCAAGCCCATTTTCCACGCATAGAAATGAATCGATGTCAATTTTCCATAGTTTGGTTCT 174878
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
||| || || | | ||||||||| || || || || ||||| | || || ||||||
Sbjct 174879 GCTACATGGATGTTAAATGATTGACTCTGGTCAATGAAAGCACCACGATCCGCGGCCATT 174938
Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029
| | | || |||||||||||| || || || || | | | |||| || | |
Sbjct 174939 TGGATTGTGGTCTTCACAGATATCTCCCACACAGTCTTGTAAAGATCTCTTAT-TTCTTT 174997
Query 37030 GGTAAATCTA--AATGT--TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTC 37085
|| || || ||| ||||| || ||||| | | ||| ||| || || ||
Sbjct 174998 GGGAATACTTTCAATAGACTGAATGGATCCATTGTTGTGTATAATGAGATTTTTCATATC 175057
Query 37086 ATTATTCCACATATTTCTACTTA--TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143
|| || ||| | || | | | | || || | | ||||| | || || |||||
Sbjct 175058 ATCATCCCATAAAT--CAGCCTCGGTGAGATCGCGAAGCAGGTGATGGTTGACCACCTGG 175115
Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203
|| |||||||| | ||||||||| || || || ||| |||| |||| || |||
Sbjct 175116 AATTCTCCAGAAAGAACTCTTCTTTGGTAAATGTTTGAAGTGAATGGCTCAAATGATTCA 175175
Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTT 37263
|| || | | || || | || || || || ||||| || || | | || ||
Sbjct 175176 TTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGGCATGGGGGCCAGCAACAGAGAGTTC 175235
Query 37264 CTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGG 37323
| || |||||| | || ||| || || || |||| ||||| | ||||| ||
Sbjct 175236 CGCAGGCCATGTTTCGCGATCTTCTGCTTCAGAGCACTCCAGTCCCACAGGTCTGTGGGT 175295
Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383
||||| |||||| |||||||| | || |||| ||| || ||| || | ||| ||
Sbjct 175296 GTCTTTCCCCACATTTCATATTGCAATATTCCTTCACTGGCCGGACAACCAGCATACGTT 175355
Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443
|||||| ||| ||| || ||||| || |||| ||||| || ||||||| ||
Sbjct 175356 TCATAAACGCCGAGTTTTTCGGCCAGTTCACAGCTAGCTTCTAAAGCCCCATAATAGATG 175415
Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503
||||| || |||||| ||| | | | ||| |||| || ||| | | | || ||
Sbjct 175416 GTTTCAAATATTTGTTGATTGAGCTTCTGGGCTCCTTCACTCTCGTAAGGAAGGCGCATC 175475
Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTA 37563
|||| ||| |||| |||| ||| || || || || || || |||| || || | |||
Sbjct 175476 AATACAAAAGCATCGGCCAGACCTTGGACGCCAATGCCGATAGGTCGGTGCCTCATGTTA 175535
Query 37564 GATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTA 37623
|| | || |||| || ||||| ||||| | ||| || || || || || || | |
Sbjct 175536 GACTTTTTCGCTTCTGGGACGGGATAGTAATTAACATCGATAATCTTGTTCAGGTTCTCA 175595
Query 37624 ACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTATTAT---TAACA 37680
|| ||||| || | | | | | || || || | || ||||| | | |||
Sbjct 175596 GTTATGATTTTGGTCACTTGTTTTAGTTTCTCAAAATCATATGTTTTATTTTCGGTTACA 175655
Query 37681 AATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAAT 37740
|| | | | | ||| || | | || || ||||| |||||||| | | |
Sbjct 175656 AACATGTTGACAGCAATTGACGCCAAGTTGCAAACAGCTACTTCATCAGCAGATGTGTAC 175715
Query 37741 TGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGAT 37800
| | |||||| || || ||||| || || | || ||||||||||| ||||||||
Sbjct 175716 TCAACAATCTCCGTGCATAGATTGCTGCATTTGATGGTTCCCAAATTCTTTTGATTGCTC 175775
Query 37801 TTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCG 37860
||| | || || | |||||| || || || || || ||||| |||| ||| |||||
Sbjct 175776 TTTCTGTTGCATGCATCTTTGTAAAGCATGTATGGAGTTCCAGTCTCTACTTGTGCCTCA 175835
Query 37861 ATAATAGATTTCCATA 37876
||||||| |||||||
Sbjct 175836 ATAATAGCCTTCCATA 175851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468514293331360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |