Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq170 89.7 4e-13
seq117 84.2 2e-11
>seq170
Length=689707
Score = 89.7 bits (98), Expect = 4e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 21003 TGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCC 21062
|| || |||| || || || || ||||||||||| ||||| || || || || ||||||
Sbjct 654314 TGTGCTATCATATGGGTGAGCAGAGCGTAGCTGGCTATGTTGAATGGCACACCCAGGCCC 654255
Query 21063 ATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGA 21122
||||| || || ||||||||| | ||||| |||| || | ||||||| |||||
Sbjct 654254 ATGTCTGCACTCCGCTGGTACAGTAGACAGGAGAGCTTGCCACTGGCCACGTGGAACTG- 654196
Query 21123 CACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCA 21181
| ||| | ||||| || || | ||||| | | || || | |||||||| || ||
Sbjct 654195 CGCAAGGCAATGACATGGTGGCAATGCCATTTGTCCAAGATCTGATGGGTTCCATGCACA 654136
Query 21182 CAT 21184
|||
Sbjct 654135 CAT 654133
>seq117
Length=882221
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 21003 TGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCC 21062
|| || |||| || || || || ||||||||||| ||||| || || || || ||||||
Sbjct 413046 TGTGCTATCATATGGGTGAGCAGAGCGTAGCTGGCTATGTTGAATGGCACACCCAGGCCC 413105
Query 21063 ATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGA 21122
||||| || || ||||||||| | ||||| |||| || | ||||||| |||||
Sbjct 413106 ATGTCTGCACTCCGCTGGTACAGTAGACAGGAGAGCTTGCCACTGGCCACGTGGAACTG- 413164
Query 21123 CACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCA 21181
||| | ||||| || || | ||||| | | || || | |||||||| || ||
Sbjct 413165 TGCAAGGCAATGACATGGTGGCAATGCCATTTGTCCAAGATCTGATGGGTTCCATGCACA 413224
Query 21182 CAT 21184
|||
Sbjct 413225 CAT 413227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427766646945120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |