Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq486 381 8e-101
seq65 96.9 5e-15
>seq486
Length=217039
Score = 381 bits (422), Expect = 8e-101
Identities = 1057/1608 (66%), Gaps = 26/1608 (2%)
Strand=Plus/Plus
Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766
||||||| | |||||||| || | | || || || ||||||| ||| |||||||
Sbjct 174754 CCTTGTCAACAGTGAATTGTATTGCATTTACAGCAGGCTTAGTACGTAAATAATACATTC 174813
Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826
| || || | || | |||| | |||||||| || || | ||| ||| | |
Sbjct 174814 CAGTCTTCAAGCCCATTTTCCACGCATAGAAATGAATCGATGTCAATTTTCCATAGTTTG 174873
Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886
| ||||||| |||||| || | |||||||| || || ||||| || || | || || |
Sbjct 174874 GTTCTGCTACATGGATGTTAAATGATTGACTCTGGTCAATGAAAGCACCACGATCCGCGG 174933
Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATA 78945
|||||| || | ||||| | || ||||| | ||| || |||| || |||| |
Sbjct 174934 CCATTTGGATTGTGGTCTTCACAGATATCTCCCACACAGTCTTGTAAAGATCTCTTATT- 174992
Query 78946 TCTTCTGGAAGGTTTGTATT---CTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002
|||| |||| || | | ||||||||||||| | ||||| ||| ||
Sbjct 174993 TCTTTGGGAATACTTTCAATAGACTGAATGGATCCATTGTTGTGTATAATGAGATTTTTC 175052
Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062
|| || |||| |||||| | |||||| | | | | ||| || || | || || ||
Sbjct 175053 ATATCATCATCCCATAAATCAGCCTCGGTGAGATCGCGAAGCAGGTGATGGTTGACCACC 175112
Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122
|| ||||||||||| | ||||| | |||||| || || |||| || | |||
Sbjct 175113 TGGAATTCTCCAGAAAGAACTCTTCTTTGGTAAATGTTTGAAGTGAATGGCTCAAATGAT 175172
Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182
||||| || || | ||| || ||||| || || || ||||| || |||| ||| | |
Sbjct 175173 TCATTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGGCATGGGGGCCAGCAACAGAGAG 175232
Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242
|| | || || | | ||| || | || |||| ||| ||||| || || |
Sbjct 175233 TTCCGCAGGCCATGTTTCGCGATCTTCTGCTTCAGAGCACTCCAGTCCCACAGGTCTGTG 175292
Query 79243 GGGACAACATTCCAAAGAT--CATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGT 79300
|| | |||| | || ||||||| | || || | ||| || | || | |
Sbjct 175293 GGTGT--CTTTCCCCACATTTCATATTGCAATATTCCTTCACTGGCCGGACAACCAGCAT 175350
Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360
| ||||||||| || |||||||| | |||||| || || ||||| || || ||||
Sbjct 175351 ACGTTTCATAAACGCCGAGTTTTTCGGCCAGTTCACAGCTAGCTTCTAAAGCCCCATAAT 175410
Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAAT 79420
| |||||||| || || | | |||||| | || ||| || || || | |||
Sbjct 175411 AGATGGTTTCAAATATTTGTTGATTGAGCTTCTGGGCTCCTTCACTCTCGTAAGGAAGGC 175470
Query 79421 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 79480
| | | ||| || || || | ||||| || ||||| |||||||||| || |||
Sbjct 175471 GCATCAATACAAAAGCATCGGCCAGACCTTGGACGCCAATGCCGATAGGTCGGTGCCTCA 175530
Query 79481 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 79540
| ||||| ||| |||||||| | ||||| ||||||| ||| ||||| || || || |
Sbjct 175531 TGTTAGACTTTTTCGCTTCTGGGACGGGATAGTAATTAACATCGATAATCTTGTTCAGGT 175590
Query 79541 TCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA--- 79597
|| ||| | |||| ||| | |||||||| ||||||| || | || |
Sbjct 175591 TCTCAGTTATGATTTTGGTCACTTGTTTTAGTTTCTCAAAATCATATGTTTTATTTTCGG 175650
Query 79598 TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657
||||||||||||| | || | || |||| || ||||| ||||| |||| |||| |
Sbjct 175651 TTACAAACATGTTGACAGCAATTGACGCCAAGTTGCAAACAGCTACTTCATCAGCAGATG 175710
Query 79658 CATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGAT 79717
|| | | || || ||||| || || || || || |||||||| ||||| | |||||
Sbjct 175711 TGTACTCAACAATCTCCGTGCATAGATTGCTGCATTTGATGGTTCCCAAATTCTTTTGAT 175770
Query 79718 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAG 79777
| |||||| |||| || ||||| || ||||| ||| | ||||| ||||| || | || |
Sbjct 175771 TGCTCTTTCTGTTGCATGCATCTTTGTAAAGCATGTATGGAGTTCCAGTCTCTACTTGTG 175830
Query 79778 ATTCTATAATCGCTTTCCAGACGACTCGAGC-----CTTTATTATAGACTTGTATCTCTT 79832
|| ||||| || ||||| | || | |||| |||| ||| || | ||
Sbjct 175831 CCTCAATAATAGCCTTCCATAGGATTTGAGCGCGGACTTTTTTA---AC--AAACCTACC 175885
Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892
|||| ||| |||| ||||||| || || || ||||||||| ||| | || ||
Sbjct 175886 TTCTTGTTCATATTTCTGATATAATGCATCAAATTCATCTCCCCAACAATCAGCCAAGCC 175945
Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952
||| | |||| ||| ||||| | |||||| | | | || || | ||||| ||
Sbjct 175946 AGGGCTGTCGTGAGGGCACATAAGGCTCCACTCCTCGTTGTTCTCAACCCTCTTCATGAA 176005
Query 79953 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 80011
||||| | ||||| ||||| ||| || || |||| | | ||||| || || |
Sbjct 176006 TAGATCTGAGATCCACAGAGC-ATAGAACAGCTCTCGCGCGCGCACTTCCTCTTTGCCCG 176064
Query 80012 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 80071
| ||||| || | || |||||| | | || |||| |||||||| || | ||| | ||
Sbjct 176065 TGTTCTTCTTCAAGTCTAGGAACTCGAATATGTCAGCGTGCCACGGCTCGAGGTAGACGG 176124
Query 80072 CCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 80131
| | | || || || ||||| || ||||| || | ||| | || ||||| || || |
Sbjct 176125 CGAAGGCGCCGGGCCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACA 176184
Query 80132 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCAC 80191
| | || ||| || | | || ||||| || || || || | ||| ||| | ||
Sbjct 176185 CGCGCAGCATGGGCACCAGCCCGTTGGAGACGCCGTTCGTGCCCGCGATGTAGGTGCCTT 176244
Query 80192 TGGCACGAATATTACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250
| || | || | || ||| | ||||| || || || ||| || ||||||||
Sbjct 176245 TCGCTCTGATGCAATGAACATGA-ACTCCTATGCCGCCCGCGGATTTGGATATTAATGCA 176303
Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATG 80298
|| | || | || || ||||| || || ||||| || || |||||
Sbjct 176304 CACTGCTTCAGAGTGTCGTAGATACCTTCGATGCTGTCGTCCTTCATG 176351
>seq65
Length=1244346
Score = 96.9 bits (106), Expect = 5e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310
|||||||| ||||| | || || ||||| || || ||||||||||| |||||||| ||
Sbjct 630964 TACATTTCAGAATGTACATTCTCCATGGCGATTTGGAATCCGTAGAAGCATCTAGCTTCA 630905
Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370
|| | |||||||| | || | ||| | | || ||||| || || || |||
Sbjct 630904 GTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGGTTCTCATTAACAATCCCATCAGAA 630845
Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTC 50411
|| ||||| || ||||| |||||||| |||||||| ||||
Sbjct 630844 GCAGCAAAGAATGCCAAGACATGTTTGATAAAATGCCTTTC 630804
Score = 93.3 bits (102), Expect = 6e-14
Identities = 156/225 (69%), Gaps = 7/225 (3%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| || | ||| ||| || || ||||||||||| || || | |||||
Sbjct 631695 CCTCATCTCTGGAGATCAATTCATTGCTGAAGGTCAGTCCGGGCATGAGCCCTCTCTTTT 631636
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
||||||| || ||||| || || ||||| |||||||| || || ||||| || || |
Sbjct 631635 TAAGCCAGAAGATGGATGCGAAACTGCCAGAGAAGAAGATGCCCTCAACTGCCGCGAATG 631576
Query 50102 CAACAAGTCTCTCTCCATAACTGGCGCTGTCATG-----TATCCACTTTTGAGCCCAATC 50156
| || | ||| || || | || || ||| || ||||||| ||||| ||
Sbjct 631575 CTACTATTCTTTCACC--GAATGTTGCGGTCTTGCTGCCGATCCACTGCATCGCCCAGTC 631518
Query 50157 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201
|||||||| |||||||| || | || || | ||||| || ||
Sbjct 631517 AGCCTTCTTCTTTACACAGGGAAGGGTCTCAACAGCATTGAACAG 631473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718252692822160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |