Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq65 123 2e-23 >seq65 Length=1244346 Score = 123 bits (136), Expect = 2e-23 Identities = 162/223 (73%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 ||||| || ||||||||||| ||||||||||| |||| || ||||| || || || Sbjct 630988 ATGTAAGTGTCAATAAGTAATGAGTACATTTCAGAATGTACATTCTCCATGGCGATTTGG 630929 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 || || || |||||||||||||| | | ||| |||||| | | || ||||| | | Sbjct 630928 AATCCGTAGAAGCATCTAGCTTCAGTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGG 630869 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 || |||||||| || |||||| ||| ||||| |||||||| | | ||| |||| | Sbjct 630868 TTCTCATTAACAATCCCATCAGAAGCAGCAAAGAATGCCAAGACATGTTTGATAA---AA 630812 Query 14322 TGCTCTTCA---TTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361 ||| |||| | || || ||| |||||| |||| ||||| Sbjct 630811 TGCCTTTCACAGTCTTTCAGGCTTTCCCAATCTGATAGATCCT 630769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479717242099600