Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq65 114 1e-20 >seq65 Length=1244346 Score = 114 bits (126), Expect = 1e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 ||||| || ||||||||||| ||||||||||| |||| || || || || || || Sbjct 630988 ATGTAAGTGTCAATAAGTAATGAGTACATTTCAGAATGTACATTCTCCATGGCGATTTGG 630929 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049 || || || || ||||||||||| | | ||| || ||| | | || ||||| | | | Sbjct 630928 AATCCGTAGAAGCATCTAGCTTCAGTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGG 630869 Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAA 14105 || ||||||||||| |||||| ||| ||||| |||||||| | | ||| ||||| Sbjct 630868 TTCTCATTAACAATCCCATCAGAAGCAGCAAAGAATGCCAAGACATGTTTGATAAA 630813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478578067646160