Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq486 345 6e-90
seq65 87.8 2e-12
>seq486
Length=217039
Score = 345 bits (382), Expect = 6e-90
Identities = 1021/1566 (65%), Gaps = 18/1566 (1%)
Strand=Plus/Plus
Query 70828 TTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATA 70887
|| ||||||| ||| ||||| || || || | || | |||| | || ||||| ||
Sbjct 174792 TTAGTACGTAAATAATACATTCCAGTCTTCAAGCCCATTTTCCACGCATAGAAATGAATC 174851
Query 70888 CTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCG 70947
|| | ||| |||| | || || |||| || || || | || ||||| || ||
Sbjct 174852 GATGTCAATTTTCCATAGTTTGGTTCTGCTACATGGATGTTAAATGATTGACTCTGGTCA 174911
Query 70948 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 71007
||||| || || | || || ||||||| || | ||||| | || ||||| | |
Sbjct 174912 ATGAAAGCACCACGATCCGCGGCCATTTGGATTGTGGTCTTCACAGATATCTCCCACACA 174971
Query 71008 GTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATT---CTGAATGGATCCACC 71063
|| || |||| || |||| | |||| |||| || | | |||||||||||||
Sbjct 174972 GTCTTGTAAAGATCTCTTATT-TCTTTGGGAATACTTTCAATAGACTGAATGGATCCATT 175030
Query 71064 ATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCT 71123
| ||||| |||||| || || |||| |||||| | |||||| | | | |
Sbjct 175031 GTTGTGTATAATGAGATTTTTCATATCATCATCCCATAAATCAGCCTCGGTGAGATCGCG 175090
Query 71124 AAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATT 71183
||| || ||| | || || || || ||||||||||| | ||||| | |||||| ||
Sbjct 175091 AAGCAGGTGATGGTTGACCACCTGGAATTCTCCAGAAAGAACTCTTCTTTGGTAAATGTT 175150
Query 71184 ACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 71243
|| | || || | ||| ||||| || || | ||| || ||||| || || || ||
Sbjct 175151 TGAAGTGAATGGCTCAAATGATTCATTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGG 175210
Query 71244 CATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCG-GATTTTATCTTTTAGAG 71302
||| || |||| ||| ||| || | || |||||| ||| ||| || | || ||||
Sbjct 175211 CATGGGGGCCAGCAACAGAGAGTTCCGCAGGCCATGTT-TCGCGATCTTCTGCTTCAGAG 175269
Query 71303 ATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGT 71362
||| | ||| || || | ||| || || |
Sbjct 175270 CACTCCAGTCCCACAGGTCTGTGGGTGTCTTTCCCCACATTTCATATTGCAATATTCCTT 175329
Query 71363 TACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAAC 71422
||| || | || ||||| || || || || ||||||||| |||||||| |
Sbjct 175330 CACTGGCCGGACAACCAGCATACGTTTCATAAACGCCGAGTTTTTCGGCCAGTTCACAGC 175389
Query 71423 TCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 71482
| || ||||| || |||||||| |||||||| || || | | |||||| | || |||
Sbjct 175390 TAGCTTCTAAAGCCCCATAATAGATGGTTTCAAATATTTGTTGATTGAGCTTCTGGGCTC 175449
Query 71483 CCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAA 71542
| || || | ||| | | | ||| || || || | ||||| |||||||
Sbjct 175450 CTTCACTCTCGTAAGGAAGGCGCATCAATACAAAAGCATCGGCCAGACCTTGGACGCCAA 175509
Query 71543 TACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAA 71602
| |||||||||| ||| ||| | ||||| ||| |||||||| | ||||| |||||||
Sbjct 175510 TGCCGATAGGTCGGTGCCTCATGTTAGACTTTTTCGCTTCTGGGACGGGATAGTAATTAA 175569
Query 71603 TATCTATAATTTTATTGAGATTTCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGA 71661
||| ||||| || || || || || | | || | |||| ||| | |||||||| |
Sbjct 175570 CATCGATAATCTTGTTCAGGTT-CTCAGTTATGATTTTGGTCACTTGTTTTAGTTTCTCA 175628
Query 71662 AAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAA 71718
|||||| || | || | ||||||||| ||| | |||| || |||| || |||
Sbjct 175629 AAATCATATGTTTTATTTTCGGTTACAAACATGTTGACAGCAATTGACGCCAAGTTGCAA 175688
Query 71719 ACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTG 71778
|| ||||| |||| |||| | || | | ||| || ||||| ||||| || || |||
Sbjct 175689 ACAGCTACTTCATCAGCAGATGTGTACTCAACAATCTCCGTGCATAGATTGCTGCATTTG 175748
Query 71779 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAAC 71838
|||||||| ||||| | |||||| |||||| |||| || ||||| || ||||| || |
Sbjct 175749 ATGGTTCCCAAATTCTTTTGATTGCTCTTTCTGTTGCATGCATCTTTGTAAAGCATGTAT 175808
Query 71839 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 71898
||||| ||||| || | || | || ||||| || ||||| | || | |||| | |
Sbjct 175809 GGAGTTCCAGTCTCTACTTGTGCCTCAATAATAGCCTTCCATAGGATTTGAGCGCGGACT 175868
Query 71899 ATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCC 71958
| || | || |||| ||| |||| ||||||| || || || ||||||
Sbjct 175869 TTTTTAACAAACCTACCTTCTTGTTCATATTTCTGATATAATGCATCAAATTCATCTCCC 175928
Query 71959 CAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCA 72018
||| || | || ||||| | || | || ||||| | |||||| | | |
Sbjct 175929 CAACAATCAGCCAAGCCAGGGCTGTCGTGAGGGCACATAAGGCTCCACTCCTCGTTGTTC 175988
Query 72019 TTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCT 72077
| || | ||||| || ||||| | ||||| ||||| ||| || || |||| | |
Sbjct 175989 TCAACCCTCTTCATGAATAGATCTGAGATCCACAGAGC-ATAGAACAGCTCTCGCGCGCG 176047
Query 72078 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 72137
||||| || || || ||||| || | || |||||| | | || |||| |||||
Sbjct 176048 CACTTCCTCTTTGCCCGTGTTCTTCTTCAAGTCTAGGAACTCGAATATGTCAGCGTGCCA 176107
Query 72138 CGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 72197
||| || | ||| | ||| | | || ||||| ||||| || ||||| || | ||| |
Sbjct 176108 CGGCTCGAGGTAGACGGCGAAGGCGCCGGGCCGCTTGTTGCCGCCCTGGTCCACGTAGCG 176167
Query 72198 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCC 72257
|| ||||| || || || | || ||| || | | || ||||| | || || || ||
Sbjct 176168 CGCCGTGTTGTTGTACACGCGCAGCATGGGCACCAGCCCGTTGGAGACGCCGTTCGTGCC 176227
Query 72258 GGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCC 72315
| ||| ||| | || | || | || | || | ||| | ||||| || || ||
Sbjct 176228 CGCGATGTAGGTGCCTTTCGCTCTGATGCAATG-AACATGA-ACTCCTATGCCGCCCGCG 176285
Query 72316 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCC 72375
||| || |||||||| || | || | || || ||||| || || || || || |||
Sbjct 176286 GATTTGGATATTAATGCACACTGCTTCAGAGTGTCGTAGATACCTTCGATGCTGTCGTCC 176345
Query 72376 ATCATG 72381
|||||
Sbjct 176346 TTCATG 176351
>seq65
Length=1244346
Score = 87.8 bits (96), Expect = 2e-12
Identities = 155/225 (69%), Gaps = 7/225 (3%)
Strand=Plus/Minus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| || ||||| ||| || || ||||||||||| || || | |||||
Sbjct 631695 CCTCATCTCTGGAGATCAATTCATTGCTGAAGGTCAGTCCGGGCATGAGCCCTCTCTTTT 631636
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
||||||| || || || || || ||||| |||||||| || || |||||||| || |
Sbjct 631635 TAAGCCAGAAGATGGATGCGAAACTGCCAGAGAAGAAGATGCCCTCAACTGCCGCGAATG 631576
Query 42207 CAATAAGTCTCTCTCCATAACCGGCACTGTCATG-----TATCCACTTTTGAGCCCAATC 42261
| | | ||| || || | | | ||| || ||||||| ||||| ||
Sbjct 631575 CTACTATTCTTTCACC--GAATGTTGCGGTCTTGCTGCCGATCCACTGCATCGCCCAGTC 631518
Query 42262 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306
|||||||| |||||||| || | || || | ||||| || ||
Sbjct 631517 AGCCTTCTTCTTTACACAGGGAAGGGTCTCAACAGCATTGAACAG 631473
Score = 84.2 bits (92), Expect = 3e-11
Identities = 111/154 (72%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415
|||||||| ||||| | || || ||||| || || ||||||||||| ||||| || ||
Sbjct 630964 TACATTTCAGAATGTACATTCTCCATGGCGATTTGGAATCCGTAGAAGCATCTAGCTTCA 630905
Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475
|| || || ||||| | || | ||| | | || || || || || || |||
Sbjct 630904 GTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGGTTCTCATTAACAATCCCATCAGAA 630845
Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAAT 42509
|| ||||| || ||||| |||||||| |||||||
Sbjct 630844 GCAGCAAAGAATGCCAAGACATGTTTGATAAAAT 630811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671124149703440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |