Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq486 228 1e-54 seq170 122 1e-22 seq117 122 1e-22 seq52 113 7e-20 seq65 107 3e-18 seq25 86.0 9e-12 >seq486 Length=217039 Score = 228 bits (252), Expect = 1e-54 Identities = 955/1491 (64%), Gaps = 60/1491 (4%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || |||||| | ||| || || ||||| ||||| | ||||||| | | | || Sbjct 176224 ACGAACGGCGTCTCCAACGGGCTGGTGCCCATGCTGCGCGTGTACAACAACACGGCGCGC 176165 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||||||||| || ||||| ||||| | ||||||||| | || || ||| Sbjct 176164 TACGTGGACCAGGGCGGCAACAAGCGGCCCGGCGCCTTCGCCGTCTACCTCGAGCCGTGG 176105 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| ||| | || || || | || || || ||| | ||| || || | || Sbjct 176104 CACGCTGACATATTCGAGTTCCTAGACTTGAAGAAGAACACGGGCAAAGAGGAAGTGCGC 176045 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AAC 97043 || | || |||| ||||| || ||| | ||||| | ||||||||| | || ||| Sbjct 176044 GCGCGAGAGCTGTTCTATGCTCTGTGGATCTCAGATCTATTCATGAAGAGGGTTGAGAAC 175985 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCC--GGTCTGTCCGATTGCT 97101 ||| | | |||||||| |||||||| || | || || || || | ||||| | Sbjct 175984 AACGAGG---AGTGGAGCCTTATGTGCCCTCAC--GACAGCCCTGGCTTGGCTGATTGTT 175930 Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGAC 97161 |||| || || ||||| || || | || || ||||| || | | || | | Sbjct 175929 GGGGAGATGAATTTGATGCATTATATCAGAAATATGAACAAGAAGGTAGGTTTGTTAAAA 175870 Query 97162 GAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTC 97221 |||| || | | || |||||||| || | ||| || |||||||||||||||| Sbjct 175869 AAGTCCGCGCTCAAATCCTATGGAAGGCTATTATTGAGGCACAAGTAGAGACTGGAACTC 175810 Query 97222 CGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281 | ||||| || ||||| ||| | || | || ||||| ||| | ||||| |||| Sbjct 175809 CATACATGCTTTACAAAGATGCATGCAACAGAAAGAGCAATCAAAAGAATTTGGGAACCA 175750 Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAG 97341 |||| || |||||| |||||||| ||||| |||||| | ||| | || || || | Sbjct 175749 TCAAATGCAGCAATCTATGCACGGAGATTGTTGAGTACACATCTGCTGATGAAGTAGCTG 175690 Query 97342 TTTGCGTTCTGGCATCGGTCAAT--CTGCC--CAAGTTTGTA---GAGGGTAAAG----T 97390 ||||| |||| |||||| ||| | || ||||||| || |||| | Sbjct 175689 TTTGCAACTTGGC----GTCAATTGCTGTCAACATGTTTGTAACCGAAAATAAAACATAT 175634 Query 97391 GTTT-----AATCTCAACCTATTGGCAAAGACGGTGCGTCTGGTGACTAGGAATCTAAAC 97445 | || || || || | | || | || | | | ||| ||| || ||| Sbjct 175633 GATTTTGAGAAACTAAAACAAGTGACCAAAA---------TCATAACTGAGAACCTGAAC 175583 Query 97446 AAGATTATCGACAATGCACTCTATCCCATTCCCTCGGCTGCCAAGTCAAACTTTAAGCAC 97505 ||||||||||| | ||||||| | || || ||||| ||| | | |||| Sbjct 175582 AAGATTATCGATGTTAATTACTATCCCGTCCCAGAAGCGAAAAAGTCTAACATGAGGCAC 175523 Query 97506 CGACCCATCGGTATAGGAGTGCAAGGCTACGCAGACGCTCTGGCCATGATGGGTATAGCC 97565 ||||| ||||| || || || ||||| || || ||| | | ||||| | | | Sbjct 175522 CGACCTATCGGCATTGGCGTCCAAGGTCTGGCCGATGCTTTTGTATTGATGCGCCTTCCT 175463 Query 97566 TACGAG-------GACTCGATGCAGTTGAATCGTGACATTTTCGAAACCATCTACCATGC 97618 |||||| || | | | || | |||| | || || ||||||||||| ||| Sbjct 175462 TACGAGAGTGAAGGAGCCCA-GAAGCTCAATCAACAAATATTTGAAACCATCTATTATGG 175404 Query 97619 AGCACTGACGGAGAGTTGCCAACTGGCCAGAGTGCACGGAGTCTACGAATCGTACCACGG 97678 || | | || || |||||||| | | ||| || || ||| |||| || Sbjct 175403 GGCTTTAGAAGCTAGCTGTGAACTGGCCGAAAAACTCGGCGTTTATGAAACGTATGCTGG 175344 Query 97679 TAGCCCGACCAGTCGTGGAGAGTTGCACTTCGACCGATACTCGGTGC-ACAGCCAAAA-- 97735 | | ||| ||||| ||| ||||| | || || || ||| ||| | Sbjct 175343 TTGTCCGGCCAGTGAAGGAATATTGCAATATGAA--ATGTGGGGAAAGACACCCACAGAC 175286 Query 97736 --GTGTGACTGGTCATCGTTGC-GCAAAGACATTGCTCGGTACGGTTTGAGAAACTCTTT 97792 ||| |||||| | || ||| | | || || | || || | |||||| | Sbjct 175285 CTGTGGGACTGGAGTGCTCTGAAGCAGA-AGATCGCGAAACATGGCCTGCGGAACTCTCT 175227 Query 97793 GCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTTGGCAATGCTGAATCTTT 97852 | || |||| || |||||||| || ||||| | || | ||||||| |||||| || Sbjct 175226 GTTGCTGGCCCCCATGCCCACCGCCTCCACTGCACAGATTCTTGGCAACAATGAATCATT 175167 Query 97853 TGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCTGGAGAGTTTCAATTGAC 97912 ||| || ||||| |||||||| ||||| ||| | | |||||||| || || || Sbjct 175166 TGAGCCATTCACTTCAAACATTTACCAAAGAAGAGTTCTTTCTGGAGAATTCCAGGTGGT 175107 Query 97913 CAACGTGCACTTGGTTCGAGA-CTTGGAACGGCTCAATCTGTGGAACGATGACATGGCCC 97971 |||| ||| || |||| || || |||| | | | ||| | ||||| ||| Sbjct 175106 CAACCATCACCTGCTTCGCGATCTCACCGAGGCTGATT-TATGGGATGATGATATGAAAA 175048 Query 97972 AGTTGATCATGTACAACAATGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGC 98031 | | || || |||||||||| |||||||| ||| | || || |||| | Sbjct 175047 ATCTCATTATACACAACAATGGATCCATTCAGTCTATTGAAAGTATTCCCAAAGAAATAA 174988 Query 98032 GCAGAA-TCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCC 98090 | ||| | ||||||||||| |||||||| | ||||| ||| | ||||| || Sbjct 174987 G-AGATCTTTACAAGACTGTGTGGGAGATATCTGTGAAGACCACAATCCAAATGGCCGCG 174929 Query 98091 GACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACC 98150 || | |||| | |||||||||||||||||| || || | | || || || || | | Sbjct 174928 GATCGTGGTGCTTTCATTGACCAGAGTCAATCATTTAACATCCATGTAGCAGAACCAAAC 174869 Query 98151 TACAGTCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATG 98210 || | |||| ||||| || || || || ||||| | |||| | ||||| || ||| Sbjct 174868 TATGGAAAATTGACATCGATTCATTTCTATGCGTGGAAAATGGGCTTGAAGACTGGAATG 174809 Query 98211 TACTATCTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 || ||| | | || ||| | || ||||| |||| ||| || || ||| Sbjct 174808 TATTATTTACGTACTAAGCCTGCTGTAAATGCAATACAATTCACTGTTGAC 174758 >seq170 Length=689707 Score = 122 bits (134), Expect = 1e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGAT-TTGCACCAAAT 70251 |||||| | ||| | || || ||||||| ||||||| || ||||| ||| || |||| Sbjct 654109 AATCCAGCTGATCGCAGAATGTTAATGTGTGCATGGAACCCATCAGATCTTGGAC-AAAT 654167 Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATG 70311 |||| | ||||| ||||| || | || ||||| || | | |||||| | || || Sbjct 654168 GGCATTGCCACCATGTCATTGCCTTGCGCAGTTCCACGTGGCCAGTGGCAAGCTCTCCTG 654227 Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371 || |||| ||| ||||||| ||||||||||| ||||| || || ||||| || ||||| Sbjct 654228 TCTACTGTACCAGCGGAGTGCAGACATGGGCCTGGGTGTGCCATTCAACATAGCCAGCTA 654287 Query 70372 TTCTATGTTGACGCACATGATTGCTCACATTACCGGCCT 70410 || || | || || ||||| || || ||||| || || Sbjct 654288 CGCTCTGCTCACCCATATGATAGCACATATTACTGGACT 654326 Score = 96.9 bits (106), Expect = 5e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 70446 CTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGAC 70505 |||| ||||| |||||||||| ||||| | ||| ||| || || | ||||| |||| Sbjct 654465 CTCATGTGTACCTAAATCACATAGAGCCTCTCAAGAAGCAGCTAGAGAGAGAGCCAAGAC 654524 Query 70506 CTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGTACGAAG 70565 | || || | |||||||||||| | ||| | || ||||| || || || |||| Sbjct 654525 CGTTCCCTACCCTGGAGTTTGCTAGAAAAATAGACTCCATTGATGACTTCAAATATGAAG 654584 Query 70566 ATTTTATAATAAAAGGTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTGTTTA 70623 |||||||||| ||||| ||| | || | ||||| ||| |||| ||||||| || Sbjct 654585 ATTTTATAATCAAAGGATACAACCCTCATCCTAAAATTGATATGGAAATGGCTGTATA 654642 >seq117 Length=882221 Score = 122 bits (134), Expect = 1e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGAT-TTGCACCAAAT 70251 |||||| | ||| | || || ||||||| ||||||| || ||||| ||| || |||| Sbjct 413251 AATCCAGCTGATCGCAGAATGTTAATGTGTGCATGGAACCCATCAGATCTTGGAC-AAAT 413193 Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATG 70311 |||| | ||||| ||||| || | || ||||| || | | |||||| | || || Sbjct 413192 GGCATTGCCACCATGTCATTGCCTTGCACAGTTCCACGTGGCCAGTGGCAAGCTCTCCTG 413133 Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371 || |||| ||| ||||||| ||||||||||| ||||| || || ||||| || ||||| Sbjct 413132 TCTACTGTACCAGCGGAGTGCAGACATGGGCCTGGGTGTGCCATTCAACATAGCCAGCTA 413073 Query 70372 TTCTATGTTGACGCACATGATTGCTCACATTACCGGCCT 70410 || || | || || ||||| || || ||||| || || Sbjct 413072 CGCTCTGCTCACCCATATGATAGCACATATTACTGGACT 413034 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 70421 GAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAG 70480 ||||| || || || | || || |||| ||||| |||||||||| ||||| | ||| Sbjct 412916 GAGTTTGTTCATACAACGGGTGATACTCATGTGTACCTAAATCACATTGAGCCTCTTAAG 412857 Query 70481 GTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAA 70540 || || || | ||||| ||||| || || | |||||||||||| | ||| | || Sbjct 412856 AAACAGCTAGAGAGAGAGCCAAGACCGTTCCCTACCCTGGAGTTTGCTAGAAAAATAGAC 412797 Query 70541 AATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAG 70600 ||||| | || || || |||||||||||||| ||||| ||| | || | ||||| Sbjct 412796 TCCATTGATGGCTTCAAATATGAAGATTTTATAATCAAAGGATACAACCCTCATCCTAAA 412737 Query 70601 ATTCCCATGGTTCTGGCTGTTTAG 70624 ||| |||| ||||||| ||| Sbjct 412736 ATTGATATGGAAATGGCTGTATAG 412713 >seq52 Length=1312528 Score = 113 bits (124), Expect = 7e-20 Identities = 204/296 (69%), Gaps = 2/296 (1%) Strand=Plus/Minus Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161 |||||||| |||||||| ||||| || || || | || ||||||||||| || ||||| Sbjct 226404 TTGCGGTAGAAGATGACGCCGGCGCGCGGGCCGCGCAGCGTCTTGTGCGTGGTGGTGGTG 226345 Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATG 127221 || | ||| || | ||| ||||||| || ||||| | |||| | | |||| ||| Sbjct 226344 ACCACGTCGCAGTGCTCGAAGGGGCTGGGGATGACGCCGGCCGCCACGAGCCCCGAGATG 226285 Query 127222 TGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCTA 127281 || || || || ||||| |||| | | | | || || |||| ||||| || | Sbjct 226284 TGCGCCATGTCCGCCATGAGCAGCGCGTTGTTGTCGTCCGCGATCTGGCGGAAGCGCTTG 226225 Query 127282 TAGTCCAAGCGC-CGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAG 127340 |||||| ||| | || | ||||| || |||||| ||||| |||| || ||||| || Sbjct 226224 TAGTCC-AGCACGCGCGAGTAGCAGCTCACGCCGGCGATGATGAGCCGCGGCTTGAACAG 226166 Query 127341 ATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCT 127396 || || | || || | | ||||||| ||| || || | || ||||||| Sbjct 226165 GCGCGCGCTGGCCGCCAGCGCGTCGTAGTCGATGAGCCCCGTGCGGGGGTCCACCT 226110 >seq65 Length=1244346 Score = 107 bits (118), Expect = 3e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || |||||| | |||| ||| | |||||||| | | | | | | || || ||| Sbjct 631509 AAGAAGGCTGACTGGGCGATGCAGTGGATCGGCAGCAAGACCGCAACATTCGGTGAAAGA 631568 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 | || |||||||| || || |||||||||||||| || || ||||| || ||||||| Sbjct 631569 ATAGTAGCATTCGCGGCAGTTGAGGGCATCTTCTTCTCTGGCAGTTTCGCATCCATCTTC 631628 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| || ||| | || ||||||||||||||||| ||| || || || || || || Sbjct 631629 TGGCTTAAAAAGAGAGGGCTCATGCCCGGACTGACCTTCAGCAATGAATTGATCTCCAGA 631688 Query 125547 GACGAGG 125553 || |||| Sbjct 631689 GATGAGG 631695 >seq25 Length=1725514 Score = 86.0 bits (94), Expect = 9e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 50162 GCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGCAGCGTGCTTTGCC 50221 ||| ||||||| ||||| | || || |||||| || | ||||| |||| |||||||| Sbjct 915171 GCAGCCTTTCCAAGTGCCTTAACTGGGGCCGATCTGGCGATATTTGCAGGCTGCTTTGCA 915112 Query 50222 TACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGCATCTTGGATGCC 50281 ||||| || ||||| || || ||| ||| || ||| | | |||||||||||| Sbjct 915111 TACATAGCTGATGTATCACATGCTAAGAGTCGGACTCTAAGGATTGGCATCTTGGATATA 915052 Query 50282 GTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTA 50321 || || |||| || ||||| || || || || | |||| Sbjct 915051 GTTTATTTGAGTACCATGCCTACAGGAGTAGCCCTAGGTA 915012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741042581747440