Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq486 228 1e-54
seq170 122 1e-22
seq117 122 1e-22
seq52 113 7e-20
seq65 107 3e-18
seq25 86.0 9e-12
>seq486
Length=217039
Score = 228 bits (252), Expect = 1e-54
Identities = 955/1491 (64%), Gaps = 60/1491 (4%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| |||||| | ||| || || ||||| ||||| | ||||||| | | | ||
Sbjct 176224 ACGAACGGCGTCTCCAACGGGCTGGTGCCCATGCTGCGCGTGTACAACAACACGGCGCGC 176165
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
||||| ||||||||||| || ||||| ||||| | ||||||||| | || || |||
Sbjct 176164 TACGTGGACCAGGGCGGCAACAAGCGGCCCGGCGCCTTCGCCGTCTACCTCGAGCCGTGG 176105
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| ||| | || || || | || || || ||| | ||| || || | ||
Sbjct 176104 CACGCTGACATATTCGAGTTCCTAGACTTGAAGAAGAACACGGGCAAAGAGGAAGTGCGC 176045
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AAC 97043
|| | || |||| ||||| || ||| | ||||| | ||||||||| | || |||
Sbjct 176044 GCGCGAGAGCTGTTCTATGCTCTGTGGATCTCAGATCTATTCATGAAGAGGGTTGAGAAC 175985
Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCC--GGTCTGTCCGATTGCT 97101
||| | | |||||||| |||||||| || | || || || || | ||||| |
Sbjct 175984 AACGAGG---AGTGGAGCCTTATGTGCCCTCAC--GACAGCCCTGGCTTGGCTGATTGTT 175930
Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGAC 97161
|||| || || ||||| || || | || || ||||| || | | || | |
Sbjct 175929 GGGGAGATGAATTTGATGCATTATATCAGAAATATGAACAAGAAGGTAGGTTTGTTAAAA 175870
Query 97162 GAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTC 97221
|||| || | | || |||||||| || | ||| || ||||||||||||||||
Sbjct 175869 AAGTCCGCGCTCAAATCCTATGGAAGGCTATTATTGAGGCACAAGTAGAGACTGGAACTC 175810
Query 97222 CGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281
| ||||| || ||||| ||| | || | || ||||| ||| | ||||| ||||
Sbjct 175809 CATACATGCTTTACAAAGATGCATGCAACAGAAAGAGCAATCAAAAGAATTTGGGAACCA 175750
Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAG 97341
|||| || |||||| |||||||| ||||| |||||| | ||| | || || || |
Sbjct 175749 TCAAATGCAGCAATCTATGCACGGAGATTGTTGAGTACACATCTGCTGATGAAGTAGCTG 175690
Query 97342 TTTGCGTTCTGGCATCGGTCAAT--CTGCC--CAAGTTTGTA---GAGGGTAAAG----T 97390
||||| |||| |||||| ||| | || ||||||| || |||| |
Sbjct 175689 TTTGCAACTTGGC----GTCAATTGCTGTCAACATGTTTGTAACCGAAAATAAAACATAT 175634
Query 97391 GTTT-----AATCTCAACCTATTGGCAAAGACGGTGCGTCTGGTGACTAGGAATCTAAAC 97445
| || || || || | | || | || | | | ||| ||| || |||
Sbjct 175633 GATTTTGAGAAACTAAAACAAGTGACCAAAA---------TCATAACTGAGAACCTGAAC 175583
Query 97446 AAGATTATCGACAATGCACTCTATCCCATTCCCTCGGCTGCCAAGTCAAACTTTAAGCAC 97505
||||||||||| | ||||||| | || || ||||| ||| | | ||||
Sbjct 175582 AAGATTATCGATGTTAATTACTATCCCGTCCCAGAAGCGAAAAAGTCTAACATGAGGCAC 175523
Query 97506 CGACCCATCGGTATAGGAGTGCAAGGCTACGCAGACGCTCTGGCCATGATGGGTATAGCC 97565
||||| ||||| || || || ||||| || || ||| | | ||||| | | |
Sbjct 175522 CGACCTATCGGCATTGGCGTCCAAGGTCTGGCCGATGCTTTTGTATTGATGCGCCTTCCT 175463
Query 97566 TACGAG-------GACTCGATGCAGTTGAATCGTGACATTTTCGAAACCATCTACCATGC 97618
|||||| || | | | || | |||| | || || ||||||||||| |||
Sbjct 175462 TACGAGAGTGAAGGAGCCCA-GAAGCTCAATCAACAAATATTTGAAACCATCTATTATGG 175404
Query 97619 AGCACTGACGGAGAGTTGCCAACTGGCCAGAGTGCACGGAGTCTACGAATCGTACCACGG 97678
|| | | || || |||||||| | | ||| || || ||| |||| ||
Sbjct 175403 GGCTTTAGAAGCTAGCTGTGAACTGGCCGAAAAACTCGGCGTTTATGAAACGTATGCTGG 175344
Query 97679 TAGCCCGACCAGTCGTGGAGAGTTGCACTTCGACCGATACTCGGTGC-ACAGCCAAAA-- 97735
| | ||| ||||| ||| ||||| | || || || ||| ||| |
Sbjct 175343 TTGTCCGGCCAGTGAAGGAATATTGCAATATGAA--ATGTGGGGAAAGACACCCACAGAC 175286
Query 97736 --GTGTGACTGGTCATCGTTGC-GCAAAGACATTGCTCGGTACGGTTTGAGAAACTCTTT 97792
||| |||||| | || ||| | | || || | || || | |||||| |
Sbjct 175285 CTGTGGGACTGGAGTGCTCTGAAGCAGA-AGATCGCGAAACATGGCCTGCGGAACTCTCT 175227
Query 97793 GCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTTGGCAATGCTGAATCTTT 97852
| || |||| || |||||||| || ||||| | || | ||||||| |||||| ||
Sbjct 175226 GTTGCTGGCCCCCATGCCCACCGCCTCCACTGCACAGATTCTTGGCAACAATGAATCATT 175167
Query 97853 TGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCTGGAGAGTTTCAATTGAC 97912
||| || ||||| |||||||| ||||| ||| | | |||||||| || || ||
Sbjct 175166 TGAGCCATTCACTTCAAACATTTACCAAAGAAGAGTTCTTTCTGGAGAATTCCAGGTGGT 175107
Query 97913 CAACGTGCACTTGGTTCGAGA-CTTGGAACGGCTCAATCTGTGGAACGATGACATGGCCC 97971
|||| ||| || |||| || || |||| | | | ||| | ||||| |||
Sbjct 175106 CAACCATCACCTGCTTCGCGATCTCACCGAGGCTGATT-TATGGGATGATGATATGAAAA 175048
Query 97972 AGTTGATCATGTACAACAATGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGC 98031
| | || || |||||||||| |||||||| ||| | || || |||| |
Sbjct 175047 ATCTCATTATACACAACAATGGATCCATTCAGTCTATTGAAAGTATTCCCAAAGAAATAA 174988
Query 98032 GCAGAA-TCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCC 98090
| ||| | ||||||||||| |||||||| | ||||| ||| | ||||| ||
Sbjct 174987 G-AGATCTTTACAAGACTGTGTGGGAGATATCTGTGAAGACCACAATCCAAATGGCCGCG 174929
Query 98091 GACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACC 98150
|| | |||| | |||||||||||||||||| || || | | || || || || | |
Sbjct 174928 GATCGTGGTGCTTTCATTGACCAGAGTCAATCATTTAACATCCATGTAGCAGAACCAAAC 174869
Query 98151 TACAGTCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATG 98210
|| | |||| ||||| || || || || ||||| | |||| | ||||| || |||
Sbjct 174868 TATGGAAAATTGACATCGATTCATTTCTATGCGTGGAAAATGGGCTTGAAGACTGGAATG 174809
Query 98211 TACTATCTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261
|| ||| | | || ||| | || ||||| |||| ||| || || |||
Sbjct 174808 TATTATTTACGTACTAAGCCTGCTGTAAATGCAATACAATTCACTGTTGAC 174758
>seq170
Length=689707
Score = 122 bits (134), Expect = 1e-22
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGAT-TTGCACCAAAT 70251
|||||| | ||| | || || ||||||| ||||||| || ||||| ||| || ||||
Sbjct 654109 AATCCAGCTGATCGCAGAATGTTAATGTGTGCATGGAACCCATCAGATCTTGGAC-AAAT 654167
Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATG 70311
|||| | ||||| ||||| || | || ||||| || | | |||||| | || ||
Sbjct 654168 GGCATTGCCACCATGTCATTGCCTTGCGCAGTTCCACGTGGCCAGTGGCAAGCTCTCCTG 654227
Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371
|| |||| ||| ||||||| ||||||||||| ||||| || || ||||| || |||||
Sbjct 654228 TCTACTGTACCAGCGGAGTGCAGACATGGGCCTGGGTGTGCCATTCAACATAGCCAGCTA 654287
Query 70372 TTCTATGTTGACGCACATGATTGCTCACATTACCGGCCT 70410
|| || | || || ||||| || || ||||| || ||
Sbjct 654288 CGCTCTGCTCACCCATATGATAGCACATATTACTGGACT 654326
Score = 96.9 bits (106), Expect = 5e-15
Identities = 128/178 (72%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 70446 CTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGAC 70505
|||| ||||| |||||||||| ||||| | ||| ||| || || | ||||| ||||
Sbjct 654465 CTCATGTGTACCTAAATCACATAGAGCCTCTCAAGAAGCAGCTAGAGAGAGAGCCAAGAC 654524
Query 70506 CTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGTACGAAG 70565
| || || | |||||||||||| | ||| | || ||||| || || || ||||
Sbjct 654525 CGTTCCCTACCCTGGAGTTTGCTAGAAAAATAGACTCCATTGATGACTTCAAATATGAAG 654584
Query 70566 ATTTTATAATAAAAGGTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTGTTTA 70623
|||||||||| ||||| ||| | || | ||||| ||| |||| ||||||| ||
Sbjct 654585 ATTTTATAATCAAAGGATACAACCCTCATCCTAAAATTGATATGGAAATGGCTGTATA 654642
>seq117
Length=882221
Score = 122 bits (134), Expect = 1e-22
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGAT-TTGCACCAAAT 70251
|||||| | ||| | || || ||||||| ||||||| || ||||| ||| || ||||
Sbjct 413251 AATCCAGCTGATCGCAGAATGTTAATGTGTGCATGGAACCCATCAGATCTTGGAC-AAAT 413193
Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATG 70311
|||| | ||||| ||||| || | || ||||| || | | |||||| | || ||
Sbjct 413192 GGCATTGCCACCATGTCATTGCCTTGCACAGTTCCACGTGGCCAGTGGCAAGCTCTCCTG 413133
Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371
|| |||| ||| ||||||| ||||||||||| ||||| || || ||||| || |||||
Sbjct 413132 TCTACTGTACCAGCGGAGTGCAGACATGGGCCTGGGTGTGCCATTCAACATAGCCAGCTA 413073
Query 70372 TTCTATGTTGACGCACATGATTGCTCACATTACCGGCCT 70410
|| || | || || ||||| || || ||||| || ||
Sbjct 413072 CGCTCTGCTCACCCATATGATAGCACATATTACTGGACT 413034
Score = 102 bits (112), Expect = 1e-16
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 70421 GAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAG 70480
||||| || || || | || || |||| ||||| |||||||||| ||||| | |||
Sbjct 412916 GAGTTTGTTCATACAACGGGTGATACTCATGTGTACCTAAATCACATTGAGCCTCTTAAG 412857
Query 70481 GTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAA 70540
|| || || | ||||| ||||| || || | |||||||||||| | ||| | ||
Sbjct 412856 AAACAGCTAGAGAGAGAGCCAAGACCGTTCCCTACCCTGGAGTTTGCTAGAAAAATAGAC 412797
Query 70541 AATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAG 70600
||||| | || || || |||||||||||||| ||||| ||| | || | |||||
Sbjct 412796 TCCATTGATGGCTTCAAATATGAAGATTTTATAATCAAAGGATACAACCCTCATCCTAAA 412737
Query 70601 ATTCCCATGGTTCTGGCTGTTTAG 70624
||| |||| ||||||| |||
Sbjct 412736 ATTGATATGGAAATGGCTGTATAG 412713
>seq52
Length=1312528
Score = 113 bits (124), Expect = 7e-20
Identities = 204/296 (69%), Gaps = 2/296 (1%)
Strand=Plus/Minus
Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161
|||||||| |||||||| ||||| || || || | || ||||||||||| || |||||
Sbjct 226404 TTGCGGTAGAAGATGACGCCGGCGCGCGGGCCGCGCAGCGTCTTGTGCGTGGTGGTGGTG 226345
Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATG 127221
|| | ||| || | ||| ||||||| || ||||| | |||| | | |||| |||
Sbjct 226344 ACCACGTCGCAGTGCTCGAAGGGGCTGGGGATGACGCCGGCCGCCACGAGCCCCGAGATG 226285
Query 127222 TGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCTA 127281
|| || || || ||||| |||| | | | | || || |||| ||||| || |
Sbjct 226284 TGCGCCATGTCCGCCATGAGCAGCGCGTTGTTGTCGTCCGCGATCTGGCGGAAGCGCTTG 226225
Query 127282 TAGTCCAAGCGC-CGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAG 127340
|||||| ||| | || | ||||| || |||||| ||||| |||| || ||||| ||
Sbjct 226224 TAGTCC-AGCACGCGCGAGTAGCAGCTCACGCCGGCGATGATGAGCCGCGGCTTGAACAG 226166
Query 127341 ATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCT 127396
|| || | || || | | ||||||| ||| || || | || |||||||
Sbjct 226165 GCGCGCGCTGGCCGCCAGCGCGTCGTAGTCGATGAGCCCCGTGCGGGGGTCCACCT 226110
>seq65
Length=1244346
Score = 107 bits (118), Expect = 3e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426
|| |||||| | |||| ||| | |||||||| | | | | | | || || |||
Sbjct 631509 AAGAAGGCTGACTGGGCGATGCAGTGGATCGGCAGCAAGACCGCAACATTCGGTGAAAGA 631568
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
| || |||||||| || || |||||||||||||| || || ||||| || |||||||
Sbjct 631569 ATAGTAGCATTCGCGGCAGTTGAGGGCATCTTCTTCTCTGGCAGTTTCGCATCCATCTTC 631628
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||||| || ||| | || ||||||||||||||||| ||| || || || || || ||
Sbjct 631629 TGGCTTAAAAAGAGAGGGCTCATGCCCGGACTGACCTTCAGCAATGAATTGATCTCCAGA 631688
Query 125547 GACGAGG 125553
|| ||||
Sbjct 631689 GATGAGG 631695
>seq25
Length=1725514
Score = 86.0 bits (94), Expect = 9e-12
Identities = 115/160 (72%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 50162 GCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGCAGCGTGCTTTGCC 50221
||| ||||||| ||||| | || || |||||| || | ||||| |||| ||||||||
Sbjct 915171 GCAGCCTTTCCAAGTGCCTTAACTGGGGCCGATCTGGCGATATTTGCAGGCTGCTTTGCA 915112
Query 50222 TACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGCATCTTGGATGCC 50281
||||| || ||||| || || ||| ||| || ||| | | ||||||||||||
Sbjct 915111 TACATAGCTGATGTATCACATGCTAAGAGTCGGACTCTAAGGATTGGCATCTTGGATATA 915052
Query 50282 GTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTA 50321
|| || |||| || ||||| || || || || | ||||
Sbjct 915051 GTTTATTTGAGTACCATGCCTACAGGAGTAGCCCTAGGTA 915012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741042581747440
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