Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_004302.1
Length=33350
Score E
Sequences producing significant alignments: (Bits) Value
seq1367 453 2e-123
>seq1367
Length=8089
Score = 453 bits (502), Expect = 2e-123
Identities = 427/544 (78%), Gaps = 0/544 (0%)
Strand=Plus/Plus
Query 29789 AATGAGTTTAGATAATTTCAAAAAGCAAACTATTACATGGGATATGATTAACCAGGCATT 29848
|||||||||||||||||| ||||| | | ||| |||||||| | | || | | ||
Sbjct 6065 AATGAGTTTAGATAATTTTAAAAATAGAGCGATTGTATGGGATACGGTCAATAAAGGCTT 6124
Query 29849 TGAACAGCCCATTCAAATTATGGAGGGAGATGTCAATGCAAGAACGCTACTTCTTAAGAT 29908
||| || |||||||| ||| | || || ||||| || ||||| | |||| ||
Sbjct 6125 CCCACAACCAATTCAAATAATGCAAGGCGACGTCAACGCTAGAACATTGTCAATTAAAAT 6184
Query 29909 AACTGATAATGGTTCTGTACTTGACTTAACAGGTTATTCAGTAAAATTAACCTATCAATA 29968
| ||||||||| | | |||| || || ||| ||||| ||||| | || ||||||||
Sbjct 6185 ACTTGATAATGGAGGCGAAATTGATTTGACTGGTCATTCATTAAAACTTACATATCAATA 6244
Query 29969 TATGTATAAATCTCAATCAGGTTTTATTATGTTAACTCCTAATGATATATCCAAGGGAGA 30028
|| ||| | | ||||||||| ||||| | ||||| | | || | ||||||||
Sbjct 6245 TACTAATAGCAGTAATTCAGGTTTTGTTATGATTCCTCCTGAAAACTTAACTAAGGGAGA 6304
Query 30029 ATTCATGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCAAATTTAAT 30088
|| || | |||||||||| || ||||||| | | ||| | || || | || |||||
Sbjct 6305 GTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCGAACTTAAT 6364
Query 30089 ACTTCTCAATGAAGATAAAGAACAAGTTATTGTCAGTAAGAATTTAGCATTCATATCAGA 30148
||||||||||||||||||||| || ||||| ||||| ||||| | | || ||||||||
Sbjct 6365 ACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTTATATCAGA 6424
Query 30149 TGATTCTACAGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 30208
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6425 TAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 6484
Query 30209 ATTATTATTGGAAAATATGCCACAAGTGATGCGTAGTGAGTTGAATGACTTACATGATCA 30268
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 6485 ATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTACATGCTCA 6544
Query 30269 AACCGATTCAAACAAGAGCAATATTGACCTTAAAGCAAATTTAGCTGATATGACGAGCTT 30328
||| || |||||||||||||||||||| |||||||| ||| | | || ||| | |||
Sbjct 6545 AACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTGAACAACTT 6604
Query 30329 ACAA 30332
||||
Sbjct 6605 ACAA 6608
Score = 185 bits (204), Expect = 2e-42
Identities = 108/112 (96%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 30681 TTAATCACAAACAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAA 30740
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6666 TTAATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAA 6725
Query 30741 GCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCAAACAGTTTACCAC 30792
|||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 6726 GCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 6777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 106596129054336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |