Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq637 96.9 2e-15 >seq637 Length=122170 Score = 96.9 bits (106), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 99394 TTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATG 99453 ||||| || ||||| | || ||||| || || ||||| || ||||| ||||| ||||| Sbjct 95892 TTGATAAGACCCGTAATAACGTCCACCGAAGGACGCTGGGTGGCCAGCACGAGGTGAATA 95833 Query 99454 CCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTAG 99513 |||||||||||||| |||||||| | || |||| | || ||| ||||| | Sbjct 95832 CCGGCCGCACGCGCTTTCTGCGCCAGACGAGCAATCAACTCTTCTACC---TTCTTACCG 95776 Query 99514 CCACCCATCATGAGATCAGCGAGTTCATCCACCACTACCACGATGTAGGGGAGT 99567 | |||||| || ||||| | |||||||||| || ||||| || || ||| Sbjct 95775 ACGGTCATCATCAGGTCAGCAAACTCATCCACCAGCACGACGATATAAGGCAGT 95722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354635445948084