Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq197 96.9 3e-15
>seq197
Length=620651
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
||||| | ||| ||||| || || || || |||||||| ||| | | | | ||
Sbjct 447665 AAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCC 447724
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | ||||| |||||| | || | ||| ||||||||| || || || || |||||
Sbjct 447725 TCCAGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCT 447784
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
|| ||| ||| ||| | || ||||| || | ||| || || | ||| |||||
Sbjct 447785 TGGATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGGGTGATGGTC 447844
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| |||||||||||||| || ||||| ||||||
Sbjct 447845 TTTCCTGTCAGAGTTTTGACGAAAATCTGCATA 447877
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
||||||| | | | ||| || || ||||||||||| || ||||| |||||||| |||
Sbjct 446248 TGCCACCACGGAGACGTAATACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGG 446307
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
| | | | || || | ||||| || ||| | || | ||| || ||||| |
Sbjct 446308 ACAAGGTGCGACCATCCTCCAGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGG 446367
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|||| || || ||||| || ||| ||||||| | || ||||| || | ||| |
Sbjct 446368 GAATACCCTCCTTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAA 446427
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || | || ||||| || || |||||||| || || ||||| |||||
Sbjct 446428 CTTCCAGAGTGATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 446476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362171281178154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |