Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq119 113 4e-20
seq1030 91.5 1e-13
seq176 82.4 6e-11
>seq119
Length=877449
Score = 113 bits (124), Expect = 4e-20
Identities = 106/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 21139 ACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTGC 21198
|| ||||||| || ||||| || || | ||| || ||| |||||||| | || |||
Sbjct 424400 ACATTGCCCAAGTCCCCGACATGGCGGACGGCGTCGCTGGGCGCGCCGTGCGTCTGCTGC 424341
Query 21199 GTAGGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGTGA 21258
||||| |||||| |||||||||| |||||||||||| || |||| |||||||||||
Sbjct 424340 AGCGGGTTGAAGTGCGCGCCGGCGGAGGTGCAGCCGTTGGTGTTGTCCCCGAACTCGTGG 424281
Query 21259 ACGTGAAAGCCGTGC 21273
| ||| |||||||||
Sbjct 424280 ATGTGGAAGCCGTGC 424266
>seq1030
Length=27445
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 18812 TTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCC 18871
|| ||||||| | ||| ||||||| ||| | ||||| ||||| || || ||||| ||
Sbjct 2671 TTACCTCCTCTAAGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCG 2730
Query 18872 GCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACG 18931
| || || | | ||||||||||||||||| || | || |||| |||||| ||| |
Sbjct 2731 GACAGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGG 2790
Query 18932 GGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCC 18991
|| | ||||| ||||| || || ||| || | ||| || ||| || ||||
Sbjct 2791 GGGATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCC 2850
Query 18992 GTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| | ||| ||||| || || || | || || || || || ||||| ||
Sbjct 2851 ACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCATATT 2903
>seq176
Length=676275
Score = 82.4 bits (90), Expect = 6e-11
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 34581 GGCGGCGTGGGACTGAACTTAACCGGCGGCAATCACATAATTATGTTGGAGCCCCACTGG 34640
|||||||| || |||||| | ||||| ||| ||| | | || |||| || ||||||
Sbjct 84379 GGCGGCGTCGGTCTGAACCTGTGCGGCGCCAACCACCTGCTGCTGCTGGACCCGCACTGG 84320
Query 34641 AACCCGCAGATCGAACTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAAAAGAAGC 34698
||||||||| | || | ||||||||| ||||| || ||||| |||| || |||||
Sbjct 84319 AACCCGCAGCTGGAGCAGCAGGCGCAGGACCGTATATACCGCGTGGGGCAGCGGAAGC 84262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414563735624836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |