Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_004913.3
Length=59866
Score E
Sequences producing significant alignments: (Bits) Value
seq997 302 2e-77
>seq997
Length=29618
Score = 302 bits (334), Expect = 2e-77
Identities = 372/508 (73%), Gaps = 13/508 (3%)
Strand=Plus/Minus
Query 55934 CTGCCGTTCTGGCGCTG--ATTGCCGCAGGTGCTTCTGCGCCTGAAATCCTCGACCAGTT 55991
|||| ||||||| |||| |||| || |||||| |||| | | ||| ||||| |||||
Sbjct 20900 CTGCAGTTCTGGGGCTGGTATTG--GCTGGTGCTCCTGCATCCGTAATTCTCGATCAGTT 20843
Query 55992 TCTGGATGAAAAGGAAGGTAACCACACCACAGCATACCGTGATGGTGCGGGTATCTGGAC 56051
|||| ||||||| || |||||| | ||| || ||| ||||||| ||||| |||||
Sbjct 20842 TCTGAATGAAAAAGAGGGTAACAGCCTCACGGCCTACAAAGATGGTGGTGGTATTTGGAC 20783
Query 56052 CATCTGCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTTATTCCTGGCATGAAGCTGTC 56111
|| ||||| || || || ||| ||| |||| || ||| | | |||||||| || |
Sbjct 20782 TATTTGCCGCGGCGCAACGATGGTTGATCGTAAACCGGTTGTGCAGGGCATGAAATTGAC 20723
Query 56112 GAAGGAAAAATGCGACCGGGTTAACGCCATTGAGCGTGATAAGGCGCTGGCATGGGTGGA 56171
||| |||||| | | ||| || || || || || ||||||| ||||||||||| ||
Sbjct 20722 ACAGGCCAAATGCAATCTGGTGAATGCTATCGAACGCAATAAGGCTCTGGCATGGGTTGA 20663
Query 56172 GAAAAACATCAAAGTGCCGCTGACCGAACCCCAGAAAGCGGGGATCGCGTCATTCTGTCC 56231
|| || || ||||| |||||||| |||||||| || ||||| || ||||||||
Sbjct 20662 CCGCAATATTTCGGTACCGCTTACCGAACCGCAGAAAGCTGGAATCGCATCTTTCTGTCC 20603
Query 56232 GTACAACATTGGTCCCGGTAAGTGTTTCCCGTCGACGTTTTACAGACGAATTAATGCAGG 56291
||||||||| || || |||||||| |||||||| ||||| || | || || ||||| ||
Sbjct 20602 GTACAACATCGGGCCGGGTAAGTGCTTCCCGTCAACGTTCTATAAGCGCATCAATGCCGG 20543
Query 56292 TGATCGAAAAGGTGCCTGCGAAGCTATTCGCTGGTGGATTAAGGACGGTGGCAGAGACTG 56351
||| || || || ||||| || |||||||||||||||| |||| |||| | |||||
Sbjct 20542 TGACCGCCCCGGGGCATGCGAGGCAATTCGCTGGTGGATTAGAGACGCTGGCCGCGACTG 20483
Query 56352 CCGTATTCGTTCA---------AACAACTGTTACGGTCAGGTATCCCGTCGTGACCAGGA 56402
||| | | | ||| ||| |||||||||||| || || ||||||||
Sbjct 20482 CCGCCTGACTAAAGGCCAGAAGAACGGCTGCTACGGTCAGGTAGAACGGCGAGACCAGGA 20423
Query 56403 GAGCGCGCTGGCGTGCTGGGGAATCGAC 56430
|| || ||||||||||||| || |||
Sbjct 20422 AAGTGCTTTGGCGTGCTGGGGGATAGAC 20395
Score = 197 bits (218), Expect = 5e-46
Identities = 244/333 (73%), Gaps = 12/333 (4%)
Strand=Plus/Minus
Query 57499 AACCATTACCGTGACAACGCGCTCACCTACAAAGCGCAGCGCGATAAAAAAGCCAGAGAG 57558
||||| || || |||||||| |||||||||||| ||||||||||||| |||| |||
Sbjct 18185 AACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAA---GCCACTGAG 18129
Query 57559 ---CTGGAACAGGCGAATGCCACCATTACTGACATGCAGGTGCGCCAGCGTGATGTTGCT 57615
|| ||||| || |||||||| | ||||||||| ||||||||||||| |||
Sbjct 18128 AAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCT 18069
Query 57616 GCGCTCGATGCAAAATACTCGAGGGAGTTAGCCGATGCGAGAGCTGAAAATGAAACTCTG 57675
||||| ||||| |||||| | | || || ||||||| || | | ||| ||||
Sbjct 18068 GCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAGCGTCTG 18009
Query 57676 CGTGCTGATGTTGCCGCTGGTCGTAAGCGCCTGCGGATCAACGCCACCTGCTCCGGTACC 57735
| | ||||| ||||| |||||||| |||| | ||||||| | || || ||
Sbjct 18008 CATAGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACT------GTCCC 17955
Query 57736 GTGCGTGAAGCCACCGGCACCTCCGGCGTGGATAATGCAACCGGCCCCCGACTGGCAGAC 57795
| | | ||| ||||||||| |||| ||| |||| |||||||| |||| | |||
Sbjct 17954 GCGAACGGAGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGAC 17895
Query 57796 ACCGCTGAACGGGATTATTTCATCCTCAGAGAG 57828
||||||||||||||||||||||||||||| ||
Sbjct 17894 TCCGCTGAACGGGATTATTTCATCCTCAGAAAG 17862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 191445521405584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |