Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_005066.1
Length=164018
Score E
Sequences producing significant alignments: (Bits) Value
seq236 170 2e-37
seq974 123 3e-23
seq637 118 1e-21
>seq236
Length=545527
Score = 170 bits (188), Expect = 2e-37
Identities = 144/177 (81%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 53628 TTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAGCG 53687
||| ||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||
Sbjct 30886 TTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCG 30827
Query 53688 CACCGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACAGC 53747
||||| |||||||| |||||||| || ||||||||||| || || || || ||||| ||
Sbjct 30826 TACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGC 30767
Query 53748 GTCCAGCAACATTTCTCGTAACAATACGTTAATATTCAAATGCTGACCACCTTCAAC 53804
||||| || | |||| || || |||||| | || | |||||||||||||| ||
Sbjct 30766 GTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTCCAC 30710
>seq974
Length=31311
Score = 123 bits (136), Expect = 3e-23
Identities = 245/357 (69%), Gaps = 8/357 (2%)
Strand=Plus/Plus
Query 135849 TTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTC 135908
||||| || | || | ||| ||||| | || | |||||||| ||||| | || |||
Sbjct 13 TTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGGTAGAACAGGGTC 72
Query 135909 GCCGCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTC 135968
|| || ||||| || | ||||| || ||||| || || || || ||||| || || ||
Sbjct 73 GCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTCTGGAAGTGCTTA 132
Query 135969 CAGAATGGGATAACGCCAGTATGACGAA--CTTCACCATGCC-CGATCTTAGAT-CCTTC 136024
|||| |||||| ||| || || ||| ||||||| ||| ||| | | ||
Sbjct 133 TAGAACGGGATACAGCCGGTGTG--GAATGCTTCACC--GCCGCGAATCGGGCTGCCCAG 188
Query 136025 CGCGCGAATCATACCAGCGTTGATACCGATGCCAGCACGCTTGCTAATATACTTGATGAT 136084
||| || || ||| |||||||| ||||| || ||||||| | || || || | |||
Sbjct 189 CGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTATTTCACGAT 248
Query 136085 TGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACGCACGA 136144
|| | | || |||||||| | || |||| ||| || |||| ||||| ||
Sbjct 249 GGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAGTACGCAGGA 308
Query 136145 ACTAAATTGTCGTGTTGGAGTACGCACACCCGCCATAATCGGAGTAGGCAGAGAGAT 136201
|| || || || ||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 309 GCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAGAGAAAT 365
>seq637
Length=122170
Score = 118 bits (130), Expect = 1e-21
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 53632 GTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAGCGCACC 53691
|| || ||||| | ||||||||| ||||||| ||| |||||| || || || ||
Sbjct 107119 GTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGAGTTAAAACGTACT 107178
Query 53692 GCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACAGCGTCC 53751
||||| ||||| || || || || ||||| || || |||||||||||||| | || ||
Sbjct 107179 GCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATGTTCCATCGCATCG 107238
Query 53752 AGCAACATTTCTCGTAACAATACGTTAATATTCAAATGCTGACCACCTTC 53801
|||| |||||| || || |||||| | |||| ||||||||||||||
Sbjct 107239 AGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACCTTC 107288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524717832938720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |