Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_005083.2
Length=244834
Score E
Sequences producing significant alignments: (Bits) Value
seq974 138 2e-27
seq962 132 8e-26
>seq974
Length=31311
Score = 138 bits (152), Expect = 2e-27
Identities = 254/369 (69%), Gaps = 10/369 (3%)
Strand=Plus/Minus
Query 147148 TTTCGCTACCTACACCGATTATGGCAGGCGTTCGTACCCCGACACGTCAATTTAGCTCGT 147207
|||| || ||||| || || ||| | ||||| || ||||| || ||||| || ||||| |
Sbjct 364 TTTCTCTGCCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCT 305
Query 147208 GTGTGAAAATCGAATCTGGCGACTCGCTGCGTTCGATCAACAAGGTATCTGAAGCTATCG 147267
| || ||||| | ||| ||| ||| ||| |||||| || || ||||
Sbjct 304 GCGTACTGATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCG 245
Query 147268 TTGATTACATTAGTAAACGTGCGGGTATTGGCGTAAACGGTGGTGCAATTCGAGCAGAGG 147327
| | ||| || | ||||| ||||| ||| | |||| ||| || || || ||
Sbjct 244 TGAAATACGTTTCCCAGCGTGCCGGTATCGGCATCAACGCCGGTCGCATCCGTGCGCTGG 185
Query 147328 GTT---CGGTTGTACGTGCGGGTGAA--ATTCGTCACACTGGCGTAATTCCTTTCTGGAA 147382
| || || || | |||||| |||| ||||| ||| || || |||| ||
Sbjct 184 GCAGCCCGATT---CGCGGCGGTGAAGCATTC--CACACCGGCTGTATCCCGTTCTATAA 130
Query 147383 ACACTTTCAGACTGCGGTTAAATCGTGTTCTCAAGGTGGTGTACGTGGCGGTGCTGCGAC 147442
||||| ||||| ||||| ||||| || ||||| || || || || ||||||||||||||
Sbjct 129 GCACTTCCAGACGGCGGTAAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCTGCGAC 70
Query 147443 TCTGACTTACCCGATCTGGCACTTAGAAGTAGAAAAGCTTCTTGTTCTGAAGAACAACAA 147502
||| ||||| || |||||| | ||||| |||| || || || ||||| ||||||
Sbjct 69 CCTGTTCTACCCTATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTCCTGAAAAACAACCG 10
Query 147503 AGGTGTTGA 147511
||||||||
Sbjct 9 TGGTGTTGA 1
>seq962
Length=32987
Score = 132 bits (146), Expect = 8e-26
Identities = 576/897 (64%), Gaps = 23/897 (3%)
Strand=Plus/Minus
Query 7631 AAAGAAAATGCCAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCTGGT 7690
|| ||||| ||||| |||||| ||||||||||| || ||| || || | || |||
Sbjct 25740 AATGAAAACGCCAACAAAGACAGTAAAGTGATCCCCACCCAGCGCGATCTGCTGGCCGGT 25681
Query 7691 ACAGTGTCGAAACAATATGCACTGGAAGAATAT-CTACCGAAGCACATTG---CAGACGC 7746
| || | ||||| ||||| | | || | | || ||| | | | ||| |||
Sbjct 25680 ATCGTCGCCAAACACTATGCCC-GTCAGCACCTGCTGCCGCGCGATGTGGTCTCAG-CGC 25623
Query 7747 TCATATCGACGGCGATATTCATTTTCACGACCTTGATTATAGCCCACTATTCCCGCAATT 7806
| | || ||| || || || | |||||| || || ||| || | |||||| ||
Sbjct 25622 ACG-AGCG-CGGTGAGATCCACTATCACGATCTCGACTATTCACCGTTCTTCCCGATGTT 25565
Query 7807 CAACTGTATGCTTATCGACATCAAGGGGATGTTCGAAGGTGGGTTCAAAATGGGTAACGC 7866
|||||||||||| || ||| | || || ||| | ||||| ||||||||||||||
Sbjct 25564 CAACTGTATGCTGATTGACCTGAAAGGCATGCTGACCCACGGGTTTAAAATGGGTAACGC 25505
Query 7867 TGAAATTGAAGAGCCAAATAGCATTGCGACTGCTGCGACTATCGTAACTCAGATCATTCA 7926
|| |||||| |||||| ||| | || || | | || | ||||| ||
Sbjct 25504 CGAGATTGAACCGCCAAAATCCATCTCCACCGCCACTGCGGTCACGGCACAGATTATCGC 25445
Query 7927 GCAAGTAAGCAGCCACATCTATGGCGGCAACACAATCAATCGCATCGACGAAGTGCTTGC 7986
|| || ||||||||| || ||||||| ||| || || ||||| ||||||||||| ||
Sbjct 25444 CCAGGTCGCCAGCCACATTTACGGCGGCACCACCATTAACCGCATTGACGAAGTGCTGGC 25385
Query 7987 TCC--TTATGTTCGCAAGTCGTACTACAAATGGTTAG-AAATCGGTCGAGAAGAACATCC 8043
|| || || |||||| | | |||| | | ||| ||| | |||| | |
Sbjct 25384 CCCGTTTGTGACCGCAAG--CTTCAACAA--GCACCGCAAAACGGCC--GAAG-AGTGGC 25332
Query 8044 AGATTCAGATTCAAAAGCCGCGATCTTTGCTCGTAAACGTGTTGAGAAAGAAACGTATGA 8103
|||| | | | |||| || ||| | || ||||||||| |||||
Sbjct 25331 AGATCC-----CGGACGCCGACGGCTATGCGCACTCGCGCACTGAGAAAGAGTGCTATGA 25277
Query 8104 TGCGTTTCAGACTTTTGAATACCAAGTCAATACAATGCAGACTTCAAATGGTCAGACACC 8163
||||| ||| | | || || | || ||||| |||| || | || || ||||| ||
Sbjct 25276 CGCGTTCCAGTCGCTGGAGTATGAGGTGAATACCCTGCATACCGCCAACGGCCAGACGCC 25217
Query 8164 ATTCACGACAATCAACTTCGGTTTAGGTACTTCGTGGGAAGAGAAACTGATTCAGAAAAG 8223
|| ||| || || || | || || |||||| | |||| ||| |
Sbjct 25216 GTTTGTGACCTTCGGTTTTGGCCTGGGCACCAGCTGGGAATCGCGTTTGATCCAGCAGTC 25157
Query 8224 CATTCTGCAAAATCGTATTGCTGGTCTAGGCAAGACTAAGAAAACTGCTATCTTCCCGAA 8283
||| |||| || ||||| | || || || |||| ||||| || | ||||||||
Sbjct 25156 CATCCTGCGCAACCGTATCTCCGGCCTCGGTAAGAACCGCAAAACGGCGGTGTTCCCGAA 25097
Query 8284 ACTTGTTTTCACGTTGAAAGACGGTGTTAACTTGAAAGAAGGTGATCCTTGTTACGGAAT 8343
||| || ||| | | ||||| | ||| |||| || ||||| ||||| ||
Sbjct 25096 ACTGGTATTCGCCATCCGCGACGGGCTGAACCACAAAGTTGGCGATCCGAATTACGACAT 25037
Query 8344 CAAGAAGCTTGCTCTTGAGTGTGCAAGTAAACGCATGTACCCAGACATTTTGAACTATGA 8403
||| |||| || || ||||| || || || ||||||||||| || ||| ||||||| ||
Sbjct 25036 CAAACAGCTGGCGCTGGAGTGCGCGAGCAAGCGCATGTACCCGGATATTCTGAACTACGA 24977
Query 8404 AAAGCTAGTTGAAACAACTGGCGGATTCAAGTCGCCTATGGGATGTCGTTCATTCTTGGG 8463
|| | || || ||| || ||| || |||| ||||| || || ||| | ||
Sbjct 24976 TCAGGTCGTAAAAGTAACCGGGTCATTTAAAACGCCAATGGGTTGCCGCAGCTTCCTCGG 24917
Query 8464 TGAATGGAAAAATGAAGATGGCGAAACTGTATTCGACGGTCGTAATAACTTAGGTGT 8520
| || || ||||| | ||||| | |||||| ||||| ||| | || ||
Sbjct 24916 CGTATACGAAGATGAAAACGGCGAGCAGATCCACGACGGGCGTAACAACCTCGGCGT 24860
Score = 114 bits (126), Expect = 2e-20
Identities = 227/336 (68%), Gaps = 0/336 (0%)
Strand=Plus/Minus
Query 8894 TGGAAAGAACTGACTGGCTACGGATTCAGTCTATACAGCACGCCAAGCGAATCGCTATGT 8953
|||||||| || |||||||| ||||| || ||||| || |||||||| || ||
Sbjct 24492 TGGAAAGAGGAAACCGGCTACGGTTTCAGCCTGTACAGTACCCCAAGCGAGAACCTGTGC 24433
Query 8954 GATCGTTTCTGTCGTCTCGATCAAGAGAAATACGGTATCATTACGGGTATCAACGACAAA 9013
|| || ||||| ||||| || | | | ||| ||| | || | | ||| |||
Sbjct 24432 GACCGCTTCTGCCGTCTGGACACCGCCGAGTTCGGCATCGTGGAAGGCGTGACCGATAAA 24373
Query 9014 GACTATTACACGAACTCGTTTCACTTAGATGTGTTCAAGAAAGTGAATCCGTTCGAGAAG 9073
| || ||||| ||| || ||| | || ||| ||||| || || |||| ||| |||
Sbjct 24372 GGTTACTACACCAACAGCTTCCACCTCGACGTGGAGAAGAAGGTAAACCCGTACGACAAG 24313
Query 9074 ATTGATTTCGAAGCAGCATACCCAATTCATGCGAATGGTGGTTTCATCTGCTATGCTGAA 9133
|| || || ||||| || || || || || || || ||||||||||| | ||
Sbjct 24312 ATCGACTTTGAAGCGGCGTATCCGCCGATCGCCAACGGCGGCTTCATCTGCTACGGCGAG 24253
Query 9134 TTCCCGAACATGCGAGACAACATCAAAGGTCTAGAGCGCGTATGGGATTACGCATATAAG 9193
| ||||||||| | ||||| | || | || || ||| ||||||||| ||| ||
Sbjct 24252 TACCCGAACATTCAGCACAACCTGAAGGCGCTGGAAGACGTGTGGGATTACAGCTATCAG 24193
Query 9194 AAAGTTGCGTACTTCGGCACAAACACGCCGATTGAC 9229
| || | || | |||||| |||||||| || |||
Sbjct 24192 CATGTGCCATATTACGGCACCAACACGCCCATCGAC 24157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 783323233582560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |