Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_005135.1
Length=173591
Score E
Sequences producing significant alignments: (Bits) Value
seq236 116 4e-21
seq637 100 3e-16
>seq236
Length=545527
Score = 116 bits (128), Expect = 4e-21
Identities = 186/266 (70%), Gaps = 6/266 (2%)
Strand=Plus/Minus
Query 6938 CCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTC 6997
|||||||| || |||||||| ||| | |||| | ||||| | ||| ||||||| |
Sbjct 61220 CCGTGAGTCAGGTGGCCGCCCTGCGCCAGGTTCATACCCAGAACGGTATCGCCCGGCTGC 61161
Query 6998 AGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCG 7057
|| || || ||| || || ||| || || || || || || || || ||||||||
Sbjct 61160 AGCAGCGCGGTGTAGACCGCGAAGTTAGCCTGGGAGCCAGAGTGCGGCTGGACGTTTGCA 61101
Query 7058 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC---GATTTCATCG 7114
| | | ||| |||||||| ||||| || || |||| | ||| ||| ||| ||
Sbjct 61100 TAGTCAGCGCCAAAAAGTTCTTTCGCACGATCGATAGCCAACTGCTCAACGATATCAACG 61041
Query 7115 GCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTA 7174
| |||| ||||| ||||| ||||||||||| || || ||||| || ||||||||
Sbjct 61040 TACT---CGCAACCGCCGTAATAGCGTTTGCCCGGGTAACCTTCAGCGTATTTGTTGGTC 60984
Query 7175 AAAATAGAACCCTGTGCTTTCATAAC 7200
| ||||||||| || | ||| ||
Sbjct 60983 AGCTGAGAACCCTGCGCCTGCATCAC 60958
Score = 93.3 bits (102), Expect = 5e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 65939 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65998
||| ||| || || || || |||| ||| ||||| || || || || || || | |
Sbjct 30895 TTACAGGCTTTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGA 30836
Query 65999 ATTAAAGCGTACGGCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATT 66058
|| |||||||| |||||||| || || || ||||| || || || ||||||||||| |
Sbjct 30835 GTTGAAGCGTACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTG 30776
Query 66059 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 66118
| | || || ||| || | ||| || || |||||||| || |||||||||||
Sbjct 30775 CTCAACCGCGTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACC 30716
Query 66119 TTCAAC 66124
||| ||
Sbjct 30715 TTCCAC 30710
>seq637
Length=122170
Score = 100 bits (110), Expect = 3e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 65939 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65998
||| | ||| || |||||||| || ||||| |||||| | || || || ||| | |
Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165
Query 65999 ATTAAAGCGTACGGCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATT 66058
||||| ||||| || || || || ||||||||||| || || |||||||| || ||||
Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225
Query 66059 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 66118
| || ||||| ||| | | |||| | || || ||||| || |||||||||||
Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285
Query 66119 TTC 66121
|||
Sbjct 107286 TTC 107288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555350745980240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |