Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq236 116 4e-21 seq637 100 3e-16 >seq236 Length=545527 Score = 116 bits (128), Expect = 4e-21 Identities = 186/266 (70%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 6938 CCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTC 6997 |||||||| || |||||||| ||| | |||| | ||||| | ||| ||||||| | Sbjct 61220 CCGTGAGTCAGGTGGCCGCCCTGCGCCAGGTTCATACCCAGAACGGTATCGCCCGGCTGC 61161 Query 6998 AGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCG 7057 || || || ||| || || ||| || || || || || || || || |||||||| Sbjct 61160 AGCAGCGCGGTGTAGACCGCGAAGTTAGCCTGGGAGCCAGAGTGCGGCTGGACGTTTGCA 61101 Query 7058 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC---GATTTCATCG 7114 | | | ||| |||||||| ||||| || || |||| | ||| ||| ||| || Sbjct 61100 TAGTCAGCGCCAAAAAGTTCTTTCGCACGATCGATAGCCAACTGCTCAACGATATCAACG 61041 Query 7115 GCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTA 7174 | |||| ||||| ||||| ||||||||||| || || ||||| || |||||||| Sbjct 61040 TACT---CGCAACCGCCGTAATAGCGTTTGCCCGGGTAACCTTCAGCGTATTTGTTGGTC 60984 Query 7175 AAAATAGAACCCTGTGCTTTCATAAC 7200 | ||||||||| || | ||| || Sbjct 60983 AGCTGAGAACCCTGCGCCTGCATCAC 60958 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 65939 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65998 ||| ||| || || || || |||| ||| ||||| || || || || || || | | Sbjct 30895 TTACAGGCTTTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGA 30836 Query 65999 ATTAAAGCGTACGGCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATT 66058 || |||||||| |||||||| || || || ||||| || || || ||||||||||| | Sbjct 30835 GTTGAAGCGTACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTG 30776 Query 66059 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 66118 | | || || ||| || | ||| || || |||||||| || ||||||||||| Sbjct 30775 CTCAACCGCGTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACC 30716 Query 66119 TTCAAC 66124 ||| || Sbjct 30715 TTCCAC 30710 >seq637 Length=122170 Score = 100 bits (110), Expect = 3e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 65939 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65998 ||| | ||| || |||||||| || ||||| |||||| | || || || ||| | | Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165 Query 65999 ATTAAAGCGTACGGCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATT 66058 ||||| ||||| || || || || ||||||||||| || || |||||||| || |||| Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225 Query 66059 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 66118 | || ||||| ||| | | |||| | || || ||||| || ||||||||||| Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285 Query 66119 TTC 66121 ||| Sbjct 107286 TTC 107288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555350745980240