Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq637 100 2e-16
>seq637
Length=122170
Score = 100 bits (110), Expect = 2e-16
Identities = 277/423 (65%), Gaps = 4/423 (1%)
Strand=Plus/Minus
Query 101009 ATTTGGCGATAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTG 101068
|| || ||||| || || ||||| |||||| ||||| |||| |||| || ||
Sbjct 60382 ATCTGACGATAGTCAACCACGCCCGGTTCCCAGGTACCTCTCACCATACCGGTCGCGGTA 60323
Query 101069 CCTGTGAAATAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATG 101128
|| ||||| |||| |||| ||||| || || ||||| |||||||| ||||||
Sbjct 60322 CCGGTGAACGGATTGTTACCGGTGTAGCCGTGTACCCCCGTCCAGCCGCGGCCATACATG 60263
Query 101129 GCAACGCCCACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGATTTAACAGCG 101188
| | || || | || |||| || | |||||| || | | || | | ||| ||
Sbjct 60262 CCCGCACCGACCACGATCTTGCCAGGCTGTACGCCTTGCTGCAGCAGGGCATCAACCCCG 60203
Query 101189 TAATCCGTGTTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAG 101248
| |||||| |||| || ||| ||| ||||| | || | || || | |
Sbjct 60202 TTTTCCGTGGTGTAGTTGGTGTCTGGTCGCCATGCTGGCGCATGCAGCGCAGCCTGGTGG 60143
Query 101249 CCCAGATCGATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCG 101308
||||| ||| |||| ||| |||| | ||| ||||||||||| || || || | |||
Sbjct 60142 CCCAGCTCGGTGTTGCTCCAGCCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGGTCG 60083
Query 101309 AGGAACTTTTGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATT 101368
||| ||| || ||| ||| | || | |||| || || | ||||| || |||
Sbjct 60082 AGGTACTGCTGAGCAGTGGTGTAGTCCACGTCTTCAATCTTATCTTTACCCGCACCGATT 60023
Query 101369 GCACTTGTTAATTCGTATGTTTTGCCCGTTT--GCAGTTGCAACTCGTCCAGCATTGCGC 101426
|| || || | || || || ||| || | |||| || ||||| |||||| ||||
Sbjct 60022 GCGCTGGTCAGCTCATAGGTACGGCCAGTCTGGGCAG--ACAGCTCGTTCAGCATCGCGC 59965
Query 101427 GCA 101429
|||
Sbjct 59964 GCA 59962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419578025988114
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |