Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq637 100 2e-16 >seq637 Length=122170 Score = 100 bits (110), Expect = 2e-16 Identities = 277/423 (65%), Gaps = 4/423 (1%) Strand=Plus/Minus Query 101009 ATTTGGCGATAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTG 101068 || || ||||| || || ||||| |||||| ||||| |||| |||| || || Sbjct 60382 ATCTGACGATAGTCAACCACGCCCGGTTCCCAGGTACCTCTCACCATACCGGTCGCGGTA 60323 Query 101069 CCTGTGAAATAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATG 101128 || ||||| |||| |||| ||||| || || ||||| |||||||| |||||| Sbjct 60322 CCGGTGAACGGATTGTTACCGGTGTAGCCGTGTACCCCCGTCCAGCCGCGGCCATACATG 60263 Query 101129 GCAACGCCCACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGATTTAACAGCG 101188 | | || || | || |||| || | |||||| || | | || | | ||| || Sbjct 60262 CCCGCACCGACCACGATCTTGCCAGGCTGTACGCCTTGCTGCAGCAGGGCATCAACCCCG 60203 Query 101189 TAATCCGTGTTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAG 101248 | |||||| |||| || ||| ||| ||||| | || | || || | | Sbjct 60202 TTTTCCGTGGTGTAGTTGGTGTCTGGTCGCCATGCTGGCGCATGCAGCGCAGCCTGGTGG 60143 Query 101249 CCCAGATCGATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCG 101308 ||||| ||| |||| ||| |||| | ||| ||||||||||| || || || | ||| Sbjct 60142 CCCAGCTCGGTGTTGCTCCAGCCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGGTCG 60083 Query 101309 AGGAACTTTTGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATT 101368 ||| ||| || ||| ||| | || | |||| || || | ||||| || ||| Sbjct 60082 AGGTACTGCTGAGCAGTGGTGTAGTCCACGTCTTCAATCTTATCTTTACCCGCACCGATT 60023 Query 101369 GCACTTGTTAATTCGTATGTTTTGCCCGTTT--GCAGTTGCAACTCGTCCAGCATTGCGC 101426 || || || | || || || ||| || | |||| || ||||| |||||| |||| Sbjct 60022 GCGCTGGTCAGCTCATAGGTACGGCCAGTCTGGGCAG--ACAGCTCGTTCAGCATCGCGC 59965 Query 101427 GCA 101429 ||| Sbjct 59964 GCA 59962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419578025988114