Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_005260.1
Length=233234
Score E
Sequences producing significant alignments: (Bits) Value
seq962 264 2e-65
seq974 156 6e-33
>seq962
Length=32987
Score = 264 bits (292), Expect = 2e-65
Identities = 833/1273 (65%), Gaps = 31/1273 (2%)
Strand=Plus/Plus
Query 37629 TTCATGCAGGCCGATATAGCCGATACTGACAGAAGCGCGTCCATTTTCAAATGCTTTCAT 37688
|||||| | |||||||||||| | | || ||||| || |||| || | | |||
Sbjct 24595 TTCATGGATGCCGATATAGCCCAGCGAAATCGACGCGCGGCCGTTTTTGAA-GATCTCAG 24653
Query 37689 -GATATCGTCATCTGGATTCAGACGTACACCGCAGGCGCCTTCGACGTAAAGAATCGGAG 37747
|| || || || | ||||| || || |||||||| ||||| | || || || || |
Sbjct 24654 AGACGTCATCGTCCGCTTTCAGGCGCACGCCGCAGGCCCCTTCCATATAGAGGATAGGCG 24713
Query 37748 CCACGCTTGCCTTAACGCCACGCAGACGATCAACACGTACCATTAGAGCTTGTTTAACTA 37807
|||||| || || || || || || | | ||| ||| || || | | |
Sbjct 24714 CCACGCGGGCTTTTACCCCTTCAAGGCGGGCGATACGGGTCATCAGCGCCTTGCGCGCCA 24773
Query 37808 CTTCCATACGCTCTTCCAGAAGCTCCCAGAAACGCATATGATTGCCGTTTGCGTCGAGTG 37867
| || || || ||||| || |||||| | |||||| || || || || |
Sbjct 24774 GCTGCAGGCGTTCATCCAGCAGTGTCCAGAATTCAGCTTCATTGCCTTTGGCCTCCAGCG 24833
Query 37868 CGATACGCGGCAGATTCAGAGTAACAACCCCTAGATTATTACGACCTTCGTGAACTTCAT 37927
|||| |||||||| ||||| | | || || || || ||||| || ||||| | | |
Sbjct 24834 CGATGCGCGGCAGGTTCAGGCTGATGACGCCGAGGTTGTTACGCCCGTCGTGGATCTGCT 24893
Query 37928 TGCCATTTTCGTCTTCCCA-ACGATGCAAGAAACTGCGGCATCCCATAGGGAACTTAAAG 37986
||| ||||| ||||| | ||| | | ||| |||||||| ||||| || |||||
Sbjct 24894 CGCCGTTTTCATCTTCGTATACGCCG-AGGAAGCTGCGGCAACCCATTGGCGTTTTAAAT 24952
Query 37987 CTGCCAGTTGTTTCAACAACTTTATCATAACTCAGAATATCTGGATACATACGCTTAGAA 38046
|| ||| || || || | ||| || |||||||||| || ||||| |||||
Sbjct 24953 GACCCGGTTACTTTTACGACCTGATCGTAGTTCAGAATATCCGGGTACATGCGCTTGCTC 25012
Query 38047 GCGCACTCCAGTGCCAGTTGCTTGATACGATAAAGCGGGTCAGTTGGCTTCAAGTTGTGT 38106
||||||||||| ||||| || ||||| ||| ||| || || ||| |
Sbjct 25013 GCGCACTCCAGCGCCAGCTGTTTGATGTCGTAATTCGGATCGCCAACTTTGTGGTTCAGC 25072
Query 38107 CCGTCTTTCAGAGCAAACACCAGTTTCGGGAACACCGGAGTGATACCCTCTTTGCCAAGT 38166
||||| | || || ||||||||||||||||||| || | | | || || ||
Sbjct 25073 CCGTCGCGGATGGCGAATACCAGTTTCGGGAACACCGCCGTTTTGCGGTTCTTACCGAGG 25132
Query 38167 CCAGCCAGTCGAACTTTCAAGATCGCTTCCTGAATCAGTTCAGCTTCCCAGCTTTCACCC 38226
|| | | || || ||| | | ||| |||| | ||||||||| |||
Sbjct 25133 CCGGAGATACGGTTGCGCAGGATGGACTGCTGGATCAAACGCGATTCCCAGCTGGTGCCC 25192
Query 38227 AGACCAAAGCCGAATGT-ACAGAAGGGAGTTTGACCGTTCGCGGAGTGAAGAGTGTTCAC 38285
|| ||||| ||||| || ||| || || || || ||||| |||| || || || |||||
Sbjct 25193 AGGCCAAAACCGAAGGTCACA-AACGGCGTCTGGCCGTTGGCGGTATGCAGGGTATTCAC 25251
Query 38286 CTCGTATTCGAGTCCCTGCATTGCATCATA-CACAGCTTTGTGAGTCTTTGCAATAGCGT 38344
||| || || || ||| | || ||||| ||| |||| | ||| || | |||
Sbjct 25252 CTCATACTCCAGCGACTGGAACGCGTCATAGCACT-CTTTCTCAGTGC--GCGAGTGCGC 25308
Query 38345 ATT--CTTTCGCATCTGGAATTTTCCAATAA-CGGGCTTCGTCCAAATGCTTTTCATGAG 38401
|| | | || || || || | ||| | ||| | | | | ||||| | |||
Sbjct 25309 ATAGCCGTCGGCGTCCGGGATCTGCCACTCTTCGGCCGTTTTGCGG-TGCTTGT--TGAA 25365
Query 38402 TCATCT--TAACATACGGTGCCAGCACTTCGTCAATACGATTAATTGTGTTGCCGCCGTA 38459
| | | ||| |||| ||||||||||||||||| || ||||| ||| ||||||||||
Sbjct 25366 GCTTGCGGTCACAAACGGGGCCAGCACTTCGTCAATGCGGTTAATGGTGGTGCCGCCGTA 25425
Query 38460 AATGTGACTTGCTACTTGCGCAATAATCTGAGCGACTACGGCAGCAGCGGTAGAAATGCT 38519
|||||| || || || || || |||||||| || || |||| ||||| || |||
Sbjct 25426 AATGTGGCTGGCGACCTGGGCGATAATCTGTGCCGTGACCGCAGTGGCGGTGGAGATGGA 25485
Query 38520 TTTCGGAGTTTCGATCTGTGCATTTCCCATACGGAACCCGCGATCTAACATGCCTTTGAC 38579
||| || | ||| |||| || || ||||| |||||| | | ||||||||| |
Sbjct 25486 TTTTGGCGGTTCAATCTCGGCGTTACCCATTTTAAACCCGTGGGTCAGCATGCCTTTCAG 25545
Query 38580 ATCTATCAACATGCAGTTAAACATTGGGAAGAATGGAGAATAGTCAAGATCATGGAAGTG 38639
|| |||| ||| ||||| ||||| |||||||| || |||||||| ||||| || ||||
Sbjct 25546 GTCAATCAGCATACAGTTGAACATCGGGAAGAACGGTGAATAGTCGAGATCGTGATAGTG 25605
Query 38640 CAGCCAGCCTTTTTCGTGTGCTTGCATAACTTCAACAGGAAGATAATGCT---TTGCAAA 38696
| | || ||||| ||| | || || || || |||| ||| |
Sbjct 25606 GATCTCACCGCGCTCGTGCGCTGAGACCACATCGCGCGGCAGCAGGTGCTGACGGGCATA 25665
Query 38697 GTGCTTACTAACAATACCAGCAACCAGATCGCGTTGAGTAGGGATTACTTTAGCGTCTTT 38756
||| || || ||||| || | ||||||||| || || ||||| |||||| ||||||
Sbjct 25666 GTGTTTGGCGACGATACCGGCCAGCAGATCGCGCTGGGTGGGGATCACTTTACTGTCTTT 25725
Query 38757 GTTAGCATTCTCATTCATGATGCCTTCATCTTCCTGCTTCATCAGTCCCATGATACGCTT 38816
||| || || ||||| | | | | | ||||| | ||| || ||| ||
Sbjct 25726 GTTGGCGTTTTCATTGAGCAGGGCAGAGTTGGTCTGCTCTACCAGGCCACGGATCTCCTG 25785
Query 38817 GGTCATG-----TCGCTGTTCAAGTCGCGAGCAACGTCACGATCATAGCGGTATTCGATG 38871
| ||| | |||| |||| | || ||||||||||| | |||||| || |||
Sbjct 25786 GTTCAGGCGACCGCGCTTTTCACGCTGC-----ACGTCACGATCGTGGCGGTACTCAATG 25840
Query 38872 TAGGAGCGAGCCA 38884
|||| ||| ||||
Sbjct 25841 TAGGCGCGGGCCA 25853
>seq974
Length=31311
Score = 156 bits (172), Expect = 6e-33
Identities = 246/350 (70%), Gaps = 2/350 (1%)
Strand=Plus/Plus
Query 43681 GTTGTTTTTCAGAACAAGGATTTTTTCAACTTCAAGATGCCACATTGGATAGTAAAGAGT 43740
|||||||||||| || || | |||| ||||| || |||||||| || ||| | || ||
Sbjct 12 GTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGGTAGAACAGGGT 71
Query 43741 AGCAGCGCCACCGCGTACACCACCCTGTGAGCAACTTTTTACCGCAGTCTGGAAATATTT 43800
||||| || ||||| || || ||||| ||||| ||||||||| |||||||| | ||
Sbjct 72 CGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTCTGGAAGTGCTT 131
Query 43801 CCAGAACGGAATAATACCAGTGTGGCGAACTTCACCACTTCGAATGCGAGAACCTTCGGC 43860
||||||| ||| || |||||| ||||||| | ||||| | || ||
Sbjct 132 ATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGGCTGCCCAGCGC 191
Query 43861 ACGAATAGCG-CCACCGTTGATACCGATACCAGCGCGTTTGCTAATATAGTCAACGATTG 43919
||| || ||| || ||||||| |||||||| || || | | || || | ||||| |
Sbjct 192 ACGGAT-GCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTATTTCACGATGG 250
Query 43920 AACTTGCGGTAGCGTTAATGCTATCGAGTTCGTCGCCGCTTTCGATCTTCACGCATGAGC 43979
|| | || ||||| ||| ||| || ||| || | |||||| ||||| ||||
Sbjct 251 CGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAGTACGCAGGAGC 310
Query 43980 TAAACTGGCGAGTCGGGGTTCGAACACCAGCAAGAATTGGCGTCGGTAGA 44029
| ||||| || || ||||| || || |||| | |||||||| || |||
Sbjct 311 TGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAGA 360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 746204065998560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |