Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq960 80.6 9e-11 >seq960 Length=33163 Score = 80.6 bits (88), Expect = 9e-11 Identities = 155/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 14345 ATTACCGCGGACATCCAACAGCTCGAGCCGGGTCGACTGA-TCGAGCTTTTCGAGGTCGA 14403 ||||| || || ||||| || ||||| || || || | |||||||||||| |||| Sbjct 9400 ATTACGGCCGATATCCAGACCCTGGAGCCTGG-CGCGTGGGTGGAGCTTTTCGAGCTCGA 9458 Query 14404 CTGCACGGAAATCGGCGCCGACATGCTGCGCTTCCATGGACACATGCAGTCGACGTCGAT 14463 | ||| |||||||||| | ||||| || || || ||| | ||||||| Sbjct 9459 CGCCACTAGCCTCGGCGCCGAACTCTACCGCTTTCACGGTTACCCCCAGCAGTCGTCGAT 9518 Query 14464 CGTGTGGCAAGGGAACGAGTACAAGCCGTGGCCGATACAGGCCGCGGGCTTCGAGCAGAC 14523 | | ||||| ||| |||||| || |||||||| ||||||| ||||||||| ||| Sbjct 9519 CTTCTGGCAGGGGCTCGAGTATTCCCCCTGGCCGATCCAGGCCGAGGGCTTCGAAATGAC 9578 Query 14524 ATCCGACGCGCAGCAGCCATCGCCGACGCTGCGGGTGGGCGACATC 14569 | | | |||||| | ||||| ||| ||||||| || || Sbjct 9579 CGGCAAGGGCTCGCAGCCGACCCCGACCCTGTCGGTGGGCAACGTC 9624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175442662333756