Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_005822.1
Length=32172
Score E
Sequences producing significant alignments: (Bits) Value
seq1367 468 1e-127
>seq1367
Length=8089
Score = 468 bits (518), Expect = 1e-127
Identities = 430/544 (79%), Gaps = 0/544 (0%)
Strand=Plus/Plus
Query 27200 AATGAGTTTAGATAATTTTAAAAAGCAAACTATTACATGGGATATGATTAACCAGGCATT 27259
|||||||||||||||||||||||| | | ||| |||||||| | | || | | ||
Sbjct 6065 AATGAGTTTAGATAATTTTAAAAATAGAGCGATTGTATGGGATACGGTCAATAAAGGCTT 6124
Query 27260 TGAACAGCCCATTCAAATTATGGAGGGAGATGTCAATGCAAGAACGCTACTTCTTAAGAT 27319
||| || |||||||| ||| | || || ||||| || ||||| | |||| ||
Sbjct 6125 CCCACAACCAATTCAAATAATGCAAGGCGACGTCAACGCTAGAACATTGTCAATTAAAAT 6184
Query 27320 AACTGATAATGGTTCTGTACTTGACTTAACAGGTTATTCAGTAAAATTAACCTATCAATA 27379
| ||||||||| | | |||| || || ||| ||||| ||||| | || ||||||||
Sbjct 6185 ACTTGATAATGGAGGCGAAATTGATTTGACTGGTCATTCATTAAAACTTACATATCAATA 6244
Query 27380 TATGTATAAATCTCAATCAGGTTTTATTATGTTAACTCCTAATGATATATCCAAGGGAGA 27439
|| ||| | | ||||||||| ||||| | ||||| | | || | ||||||||
Sbjct 6245 TACTAATAGCAGTAATTCAGGTTTTGTTATGATTCCTCCTGAAAACTTAACTAAGGGAGA 6304
Query 27440 ATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCAAATTTAAT 27499
|| | | |||||||||| || ||||||| | | ||| | || || | || |||||
Sbjct 6305 GTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCGAACTTAAT 6364
Query 27500 ACTTCTCAATGAAGATAAAGAACAAGTTATTGTCAGTAAGAATTTAACATTTATATCAGA 27559
||||||||||||||||||||| || ||||| ||||| ||||| | || |||||||||||
Sbjct 6365 ACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTTATATCAGA 6424
Query 27560 TGATTCTACAGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 27619
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6425 TAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 6484
Query 27620 ATTATTATTGGAAAACATGCCACAAGTTATGCGTAGTGAGTTGAATGATTTACATGCTCA 27679
||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 6485 ATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTACATGCTCA 6544
Query 27680 AACTGAATCAAACAAGAGCAATATTGAACTTAAAGCAAATTTAGCTGATATGACTAGCTT 27739
||||||||||||||||||||||||||| |||||||| ||| | | || ||| | |||
Sbjct 6545 AACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTGAACAACTT 6604
Query 27740 ACAA 27743
||||
Sbjct 6605 ACAA 6608
Score = 190 bits (210), Expect = 4e-44
Identities = 108/110 (98%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 28094 AATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 28153
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6668 AATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 6727
Query 28154 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCAC 28203
|||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 6728 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 6777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 102826609360952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |