Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_005856.1
Length=94800
Score E
Sequences producing significant alignments: (Bits) Value
seq813 486 1e-132
seq651 143 2e-29
>seq813
Length=55966
Score = 486 bits (538), Expect = 1e-132
Identities = 554/744 (74%), Gaps = 0/744 (0%)
Strand=Plus/Minus
Query 71895 GCAGGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGCCCGCCCATCTATGGGGAAGACC 71954
|| || || |||||||| ||| | || || |||||||| || || || ||||| || ||
Sbjct 23453 GCCGGTCTGCAGCCGTCGGATTTGATTATCGTCGCCGCGCGTCCGTCGATGGGTAAAACG 23394
Query 71955 ACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCGTAACGATAAGCCCGTATTGGTT 72014
|| ||||||||||| |||||||||||||| || | | |||||||| ||| || ||
Sbjct 23393 ACATTTGCGATGAACCTCGTCGAAAATGCGGCGATGTTGCAGGATAAGCCGGTACTGATT 23334
Query 72015 TTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGCGCTCACTGGCTTCTCTTGCACGC 72074
|| |||||||||||||| | | ||| | |||||||| || ||||| || || | |||
Sbjct 23333 TTCAGCCTTGAGATGCCCTCCGAGCAGATCATGATGCGTTCTCTGGCATCGCTGTCGCGC 23274
Query 72075 GTTGATCAGACTCGTATTCGGACAGGGCAACTTAACGACGAGGATTGGGCGCGGGTTTCT 72134
|| || ||||| || || || || || || || |||| ||||| |||||||| | ||
Sbjct 23273 GTGGACCAGACCCGCATCCGTACCGGTCAGCTCGACGATGAGGACTGGGCGCGCATCTCC 23214
Query 72135 GGCGCAATGGGTATTCTGTTGGACAAGCAGAATATTTTTATTGATGACTCAAGCGCCCTG 72194
||| | ||||| |||||| |||| || | || || | |||||||||||| || ||||
Sbjct 23213 GGCACCATGGGCATTCTGCTGGAAAAACGTAACATCTATATTGATGACTCCTCCGGCCTG 23154
Query 72195 ACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTGTTTATAAAGAAAATGGTGGTTTGAGC 72254
|||||||| || | ||||||||||| |||||| | ||| | || ||| | ||
Sbjct 23153 ACGCCGACGGAAGTCCGTTCCCGCGCGCGTCGTATCGCCCGCGAACACGGCGGTATCGGC 23094
Query 72255 ATGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCAAGATAACCGAACG 72314
| || |||||||||||||| || || ||||||||||| ||| || ||||| |||
Sbjct 23093 CTTATCATGATCGACTACCTTCAGCTGATGCGCGTCCCGTCGCTCTCCGACAACCGTACG 23034
Query 72315 CTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGTACCG 72374
||||| || ||||| ||||| ||||| || |||||||| || || || | || || |||
Sbjct 23033 CTGGAGATCGCCGAAATTTCCCGCTCGCTCAAGGCGTTAGCCAAAGAGCTGCACGTGCCG 22974
Query 72375 GTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGTA 72434
|||||||| |||| || ||||| || || || ||||| ||||| |||||||| |||||
Sbjct 22973 GTGGTGGCGCTGTCGCAGCTTAACCGCTCTCTGGAACAACGTGCCGACAAACGTCCGGTC 22914
Query 72435 AATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTG 72494
|| || || | |||||||| || | || |||||||| || ||| | || |||||| |
Sbjct 22913 AACTCCGACCTGCGTGAATCCGGCTCGATCGAGCAGGATGCCGACTTAATCATGTTTATC 22854
Query 72495 TATCGCGACGAAGTTTATCACCCGGATAGCGAAATGAAGGGCATTGCCGAGGTAATTATC 72554
|| || || || ||||||||| | | ||||| |||| || || ||||| | |||||
Sbjct 22853 TACCGTGATGAGGTTTATCACGAGAACAGCGACCTGAAAGGGATCGCCGAAATTATTATT 22794
Query 72555 GGAAAGCAACGAAATGGCCCAATTGGCACGGTGAGATTGGCTTTTAACGGCCAATACTCA 72614
|| || ||||| || ||||| || || |||||| | || | ||||||||||| | ||
Sbjct 22793 GGTAAACAACGTAACGGCCCGATCGGGACGGTGCGTCTGACCTTTAACGGCCAGTGGTCG 22734
Query 72615 CGGTTTGATAACTATGCCGGTGCT 72638
|| || || |||||||||||| ||
Sbjct 22733 CGTTTCGACAACTATGCCGGTCCT 22710
Score = 136 bits (150), Expect = 2e-27
Identities = 231/332 (70%), Gaps = 2/332 (1%)
Strand=Plus/Minus
Query 21063 GGTGTAAACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGATCAGGTATATA 21122
|| |||||||| || || || | |||| ||||| || |||||||| | | || ||
Sbjct 13771 GGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATG 13712
Query 21123 CCAAATGGCGGCGCGGTCGG-AAGACTCAGCATCGCAACGAATGAATCATGGCGCGACAA 21181
|| | ||| ||||| || | || | | || | || || ||||| ||||| || ||
Sbjct 13711 CCGAGTGGTGGCGCAGTTGCCAACATTACGC-TGGCTACTTCCGAATCCTGGCGTGATAA 13653
Query 21182 GCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAAAACT 21241
|| || | ||||||||| || |||||||| || || |||| || |||||
Sbjct 13652 AGCGACCGGTGAGATGAAAGAGCAGACTGAATGGCACCGCGTGGTGCTGTTTGGCAAACT 13593
Query 21242 TGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGAAACT 21301
|| ||| |||| |||||||| | || ||||||||||||||||| |||||||| ||||
Sbjct 13592 GGCAGAAGTTGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATCGAAGGCCAACT 13533
Query 21302 TAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTATCGT 21361
|||||||| ||||| ||| | |||| | || ||||| || ||| || | ||
Sbjct 13532 GCGCACCCGTAAATGGACCGATCAGTCCGGCGCTGAGAAGTACACCACCGAAGTTGTGGT 13473
Query 21362 CAGCCAGGGCGGCACCATGCAAATGATCGGCG 21393
| | ||||| |||||||| ||| | ||||
Sbjct 13472 AAACGTTGGCGGTACCATGCAGATGCTGGGCG 13441
>seq651
Length=115633
Score = 143 bits (158), Expect = 2e-29
Identities = 292/429 (68%), Gaps = 6/429 (1%)
Strand=Plus/Minus
Query 65927 GCCAGCGCGCGGCAGGCAGAGGATATGCTCGCGCTTATGCGTAAGTCTCTGGGTTCTCTT 65986
|||||||| | | ||||| |||| ||| || || |||||||| | || || |
Sbjct 28280 GCCAGCGCCAAGAAAGCAGAAGATACGCTGGCCCTGCTGCGTAAGAGCATCGGCTCGTTA 28221
Query 65987 CCTGTTGTTCCCCTGAGTGTTGAAAATCCCATTGAATTAACGCTGACCGACTGGGTACGT 66046
|| || ||||| ||| | |||| || ||||| |||||||||||||| ||||||||
Sbjct 28220 CCGGTCGTTCCGCTGGCGCTGGAAACGCCAATTGAGTTAACGCTGACCGAATGGGTACGC 28161
Query 66047 GATGGTAGTGCTCCACAGGGATTTCAAATGGGGGATGCGGCAGAACTTAAGGCAGTGCTT 66106
||| ||| | ||||| || || || |||| || || || || || ||||
Sbjct 28160 AGCGGTGCTGCGGCTCAGGGTTTCCAGATCCTTGATGAAGCCGAGCTGAAAGCCCTGCTG 28101
Query 66107 GAGGATGGCGGTATTGCCCGAGTGAAAAAGCAGGATTTGGGAAGCGATGAAATTTCCACA 66166
|| |||||||| | ||| | ||| ||||||||| ||| ||||| ||||| ||
Sbjct 28100 GAAGATGGCGGCGTGATCCGCGCGAAGAAGCAGGATCTGGTGAGCGACGAAATCGCCGTC 28041
Query 66167 CACCTGGAAGCTGGCAAGCTCGTTACTAAGTTGGCACTCGACTGGCAGAAACGCATTAAA 66226
||| | ||||| ||||| | || || ||| |||| |||||||||||| | || ||| |
Sbjct 28040 CACATCGAAGCGGGCAAAGTGGTCACCAAGCTGGCGCTCGACTGGCAGCAGCGTATTCAG 27981
Query 66227 TTTACACTGGACCATAACTTCAGCCTTACCAGCGTC--AAATT-TGCGGATGAATTGCTT 66283
|| || | | || | | | | |||||| || || ||| || || |||
Sbjct 27980 TTCGTGATGTGCGACGACGGCTCCGTGA--AGCGTCTGAAGTTCTGC-GACGAGCTGCGC 27924
Query 66284 GAGCAGAACTCTGATATTGATAGTGAAGATGTTGCGCAGCGACTGGACGCAGATTTCTTC 66343
|| |||||| ||||| || || |||||| || ||||| | ||||| || ||| ||
Sbjct 27923 GATCAGAACGAAGATATCGACAGGGAAGATTACGCCCAGCGTTTCGACGCGGACTTCATC 27864
Query 66344 CTGTTGACC 66352
||| |||||
Sbjct 27863 CTGATGACC 27855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 303228569951874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |