Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_005857.1
Length=51601
Score E
Sequences producing significant alignments: (Bits) Value
seq1547 897 0.0
seq997 266 1e-66
>seq1547
Length=4346
Score = 897 bits (994), Expect = 0.0
Identities = 1199/1658 (72%), Gaps = 18/1658 (1%)
Strand=Plus/Minus
Query 15828 AAACCACTTCCGGCTATGAGCGCAGCCACCGCATCGACCTGCCGCAAGCGGGGAGCACCT 15887
||||||| || || ||||| ||||||||||| || || | || || ||||| |||||||
Sbjct 4346 AAACCACCTCTGGTTATGAACGCAGCCACCGTATTGATTTACCTCAGGCGGGCAGCACCT 4287
Query 15888 GGACGCTCCGCCTGCGGAAAGTCTCTCCGGACGCCAACAGCGTCAAAATCGGCGATGTGA 15947
|||| || | ||||| ||| | | | || ||||| |||| || || ||||| ||
Sbjct 4286 GGACCATCAGGCTGCGCAAAATTACAGCCGATGCCAATAGCGCGAAGATTGGCGACACGA 4227
Query 15948 TGACGCTGCAGAGCTACACAGAAGTGATTGACGCGAAGCTGCGCTATCCCCACACAGCGC 16007
|||||||||| |||| ||| ||||| || ||||| || || |||||||| |||| ||||
Sbjct 4226 TGACGCTGCAAAGCTTCACCGAAGTAATCGACGCCAAACTTCGCTATCCGAACACCGCGC 4167
Query 16008 TGCTTTATGTCGAATTTGATTCCAGTCAGTTTAACGGCTCCATTCCACAGATTTCCTGCG 16067
| || || ||||||||||||| || ||||| || ||||| ||||| || ||||||||||
Sbjct 4166 TACTGTACATCGAATTTGATTCGAGCCAGTTCAATGGCTCAATTCCGCAAATTTCCTGCG 4107
Query 16068 AACCGCGTGGACGAGTTATCCGCGTTCCTGATAACTACAACCCGGAGAGCCGCGAATATA 16127
| || || ||||| ||||| || || || |||| ||| ||||||| | | |||| ||
Sbjct 4106 AGCCTCGCGGACGTGTTATTCGTGTGCCCGATACCTATGACCCGGAAA--CACGAACGTA 4049
Query 16128 C--CGGCACATGGACAGGTGGCTTTAAGTGGGCCTGGACGGATAACCCGGCATGGATTTA 16185
| |||||| ||||| || | ||||||||||| |||||||||||||| || ||||| |
Sbjct 4048 CAGCGGCACCTGGACGGGCGCATTTAAGTGGGCATGGACGGATAACCCTGCGTGGATATT 3989
Query 16186 TTACGATATCGTTGTTTCAGACCGGTTTGGCCTAGGCAACCGTCTGACCAGCGCGAATAT 16245
||||||| | || || | ||||| || ||||| || || || || || || || ||
Sbjct 3988 TTACGATCTGGTGGTCACTGACCGCTTCGGCCTTGGTAATCGGCTAACGGCAGCCAACAT 3929
Query 16246 CTCTAAATGGACGCTGTACCAGATCGCACAATACTGCGATCAGATGGTCCCCGATGGTAA 16305
| |||||||| || || ||| |||| ||||| || ||||| ||| || ||||||||
Sbjct 3928 CGACAAATGGACTCTTTATCAGGTCGCTCAATATTGTGATCAATCGGTACCGGATGGTAA 3869
Query 16306 GGGAGGCGATGGCATGGAGCCTCGCTATCTCTGTAACGTCTACGTGCAGGAACGCAACGA 16365
||| ||| || | || || || || ||| ||||| ||| | || || || || ||
Sbjct 3868 GGGCGGCAGCGGAACTGAACCACGTTACACCTGCAACGTATACATTCAAGATCGAAATGA 3809
Query 16366 TGCGTACACCGTGCTGCGCGATTTTGCCGCCATTTTCCGGGGGATGACCTGCTGGAGCGG 16425
|| |||||||| ||||| ||||||||||||||||| || || ||||||| |||| | |
Sbjct 3808 CGCTTACACCGTCCTGCGAGATTTTGCCGCCATTTTTCGAGGCATGACCTACTGGGGAGA 3749
Query 16426 TGAGCAGATTGTCGTACAGGCTGATATGCCGCGTGATGTCGACTTTAACTACACGCGGGC 16485
|| |||||||| | | || || ||||| | |||||||| |||| |||||||| ||
Sbjct 3748 CGACCAGATTGTTGCCCTTGCAGACATGCCCAGAGATGTCGATTTTACCTACACGCACGC 3689
Query 16486 GAACATTAT---TGGCAAACCGCGCTATTCAAGCAGCACCAGTAAGGCTCGTTACACCAA 16542
||| | | |||||| ||||| || ||||| | ||| ||| ||||| ||
Sbjct 3688 TAACGTAGTCGACGGCAAATTTGTGTATTCCAGTAGCACAACTAAAAGTCGCTACACAAA 3629
Query 16543 CGCGCTGGTCTCGTGGTCAGACCCGGCAAACGCCTACGCCGACGCAATGGAACCGGCGTT 16602
||| || || || ||||| || |||||||| | ||| || || |||||||| || | ||
Sbjct 3628 CGCTCTTGTATCCTGGTCTGATCCGGCAAATGGCTATGCTGATGCAATGGAGCCAGTCTT 3569
Query 16603 CGTCCCGGAGCTGGTCAGCAGGTACAGCTTTAACCAGCTGGAAGTGACGGCCATCGGGTG 16662
|| | ||||||||| | || | || |||||||| || | || |||||||| ||
Sbjct 3568 CGAACAGGAGCTGGTGGCGCGCTATGGTTTCAACCAGCTCGAGATCACCGCCATCGGTTG 3509
Query 16663 TACTCGACAGAGCGAAGCCCACCGTAAGGGCCTGTGGGGCATACTGACCAACAACAAAGA 16722
|| || ||| || || || | || || | ||||| || ||||||||||| |||||
Sbjct 3508 CACCCGGCAGTCTGAGGCTAACAGGAAAGGGCGCTGGGGGATCCTGACCAACAATAAAGA 3449
Query 16723 CCGCATGGTTGAGATTGATGTGGGGCTGGACGGTAAAATCCCGCAGCCGGGCTACATCAT 16782
| || || | |||| || || ||||||||||| || || |||||||||||||| ||
Sbjct 3448 TAGGATTGTAACGTTTGACGTTGGTCTGGACGGTAATATTCCTCAGCCGGGCTACATAAT 3389
Query 16783 TGGACTGGCTGATGAACTTCTGGCCGGACGCGTGAACGGCGGGCG--TATCAGCGCAGTT 16840
|| | ||||| | ||| | ||| | | ||||| || |||| ||| |||
Sbjct 3388 TGCTGTTTCTGATCGAAATCTTTCAGGAAGAGATTTAGGCGGTCGATTATC--CGCGGTT 3331
Query 16841 AATGGACGGGTGATTACCCTTGACCGGGATACTGA-TGCAAAAGCTGGTGACCGGCTGCA 16899
||||| || || | | |||||||||| ||| | ||| || || |||||| || |
Sbjct 3330 AATGGGCGTGTTCTCAAACTTGACCGGG-TACCAAGTGCTAAGGCCGGTGACAGGATAAT 3272
Query 16900 GCTGAACCTGCCGTCAGGCATATCTCAGGCCCGGACGATCCAGTCAGTCAACGGTCTCCG 16959
| | |||||||| || || || |||| |||| ||||| ||||| | |||| |
Sbjct 3271 GGTAAACCTGCCATCGGGTATCACTCAATCCCGAACGATTCAGTCCCTGTCCGGT----G 3216
Query 16960 ACA-GGTCACGGTTACGACGGCGTACAGTGAGACGCCGGAGGTGGAATGTGTCTGGGTGA 17018
| | |||||| || || || || | || ||| || ||| || ||| ||||| |
Sbjct 3215 AAATGGTCACCGTGACCACCGCTTTTAGCGAGCTTCCACAGGCCGAGGCTGTATGGGTTA 3156
Query 17019 TTGAGTCTGACGATCTGTATGTTCAGCAGTACCGCGTTATCGGGGTCAAGGACAACAACA 17078
|||| ||||| || || |||| ||||||||| | || || | |||| || |||||
Sbjct 3155 TTGAATCTGATGAACTCTATGCGCAGCAGTACAGGGTAATTAGTGTCACCGATAACAATG 3096
Query 17079 ACGCCACGTATACAATCACCGGCGTGGCCCACGATCCGGACAAATTCCCGCGTATCGATA 17138
||| || ||||| ||||| || | ||||||||||| |||||| || || ||||
Sbjct 3095 ACGGGACTTATACCATCACGGGGGCAAATCACGATCCGGATAAATTCGATCGCATTGATA 3036
Query 17139 CCGGCGCGATCATCGACCAGCGCCCGATAAGCGTTATCCCTCCAGGGAGTCAGCAGCCGC 17198
|||| || || || |||||||| ||| | ||||| ||||| || || | ||| |||||
Sbjct 3035 CCGGAGCCATGATTGACCAGCGGCCGGTGAGCGTGATCCCGCCGGGCAACCAGTCGCCGC 2976
Query 17199 CGGAAAGCATCGTTATCAGCTCGTATTCTGTGGTGAATCAGGGCATCAGCGTCGAAACGA 17258
| | || |||||| |||||||||| ||| |||||| | || ||||||||||||||||
Sbjct 2975 CTGCAAACATCGTGATCAGCTCGTTTTCCGTGGTGCAGCAAAATATCAGCGTCGAAACGA 2916
Query 17259 TGCAGGTGCACTGGAATGCGGTGAAAGATGCGATTTCGTATGAAGCGCAGTGGCGACGTA 17318
||| ||| |||| | || | | | || || | ||||||||||| ||||| || |
Sbjct 2915 TGCGCGTGAGCTGGGACCAGGCGCAGAACGCTATCGCCTATGAAGCGCAATGGCGCCGCA 2856
Query 17319 ATGACGGTAACTGGATTAACGTGCCGCGCAGCTCGACCACCTCGTTCGAGGTCAGCGGCA 17378
| || || |||||| ||||||||||||||||||| ||||| || ||||| || | || |
Sbjct 2855 ACGAGGGGAACTGGGTTAACGTGCCGCGCAGCTCCACCACGTCATTCGACGTTACGGGGA 2796
Query 17379 TTTACGCCGGTCGTTATCTGGCCCGTGTCCGGGCGATCAACGCTGCAGAGGTCTCCAGCG 17438
|||| |||| || || |||| || || || || |||||||| || || | || ||
Sbjct 2795 TTTATTCCGGGCGGTACCTGGTGCGCGTGCGTGCTATCAACGCAGCGGAAATTTCTTCCG 2736
Query 17439 GCTGGGCATATTCAGAAGAGAAAACGCTGACAGGAAAA 17476
| |||| ||||||||||||||| ||| |||| || |||
Sbjct 2735 GATGGGGATATTCAGAAGAGAAGACGTTGACCGGCAAA 2698
>seq997
Length=29618
Score = 266 bits (294), Expect = 1e-66
Identities = 531/784 (68%), Gaps = 12/784 (2%)
Strand=Plus/Minus
Query 12762 GCAACCTTTATTCAGGGATTTAAACCATGAGCCTTAACACAGATTATCAGAAGCTGGAGC 12821
|||||||| | |||| || ||||||| ||| ||||||||| || || |
Sbjct 783 GCAACCTTCAAACAGGCATACGCACCATGA---TTACTGAAGATTATCAACGCCTCGAAC 727
Query 12822 CGGGTGATTCAATCCGGCTTTTTGAAATTGACGGTCGAGCCTTCAATATGGGTGAGGTTT 12881
||||| | ||| || ||| |||| | |||||| || || | ||| || |||
Sbjct 726 CGGGTAAAAAAATACGTCTTCTTGAGGTAGACGGTTCTGCGTTTGGTCTGGACGACGTTC 667
Query 12882 TATATTTTCACGGTTATAACGTCCCGCATTCAGCCGAGGAAATCGTCGCCGCCGGTGGCG 12941
| ||||||| ||||||| |||||||| | || || || || | || || |||||||
Sbjct 666 TGCGCTTTCACGCTTATAACCTCCCGCATACTGCAGAAGAGATTGCGGCTGCTGGTGGCG 607
Query 12942 ATGAATCAAAGCTGCCAGCGAAAAGTATCTGGTGGCAGGGCATCGAATATAAAGCCTGGC 13001
| ||||||||| | ||||| |||||||||||||||||| || ||| |||||||
Sbjct 606 ACGAATCAAAGTTAAAGGCGAAGAGTATCTGGTGGCAGGGCGAAGAGTATGGTGCCTGGC 547
Query 13002 CGTGCGAGCTGGAAGGGATTGAATCCACCACCTCGGGGAGCGATGCGCAACCGACGCTGC 13061
| | |||| || || | ||| | | || || || || || ||||||||
Sbjct 546 CATATAAGCTCGAGGGACTGGAAGCGTCATCCGATGGCAGTAGCGCCCAGCCGACGCTCA 487
Query 13062 GAGTGGGCAATATCGACGGGTCAATTACAGCACTATGCCTGTATTACGACGACATGGCGC 13121
|| | ||| || ||| | || || || || || || ||| || ||||| ||| ||
Sbjct 486 CCGTTGCCAACATTGACAGCTCTATCACTGCGCTCTGTCTGGCCTATGACGATATGCTGC 427
Query 13122 AGGCGCGGGTCACGATACATGAGACCCAAAAGCAGTATCTCGATGCGCAAAACTTCCCGG 13181
|||| || ||||| ||||| || ||| || || ||||||| || |||||||
Sbjct 426 AGGCCAAAGTTACGATTCATGACACTTTTGCGCATTACCTGGATGCGCGCAATTTCCCGG 367
Query 13182 AGGGAAACACGTCAGCAGACCCTACGCAGGA---AAAGCGTCAGCTGTATTTTATCGATG 13238
| ||||| | ||||||| || ||||| |||||| | | | | |||||| |
Sbjct 366 ATGGAAATCCAACAGCAGATCCCTTGCAGGTGAGAAAGCG---GGTTTTCTATATCGACG 310
Query 13239 CCAAAAATCTTGAAACT---GATGAAGCGGTGGAGTTCACTCTCTCAAGCCCGATGGACC 13295
|||||| || | | |||| | ||||| ||| ||||||||||||| |
Sbjct 309 GTAAAAATAGCGAGCTTCCCGGTGAAAGTATCGAGTTTGTTCTTACAAGCCCGATGGATC 250
Query 13296 TGCAGGGGCTAATGATTCCTACCCGGCAATACCACTCGATTTGCACATGGTGTACTCGCA 13355
||||||| | |||||||| ||| | || | || || ||||||||||||| | || |
Sbjct 249 TGCAGGGATTGATGATTCCGACCAGACAGTTGCATTCCCTTTGCACATGGTGCATCCGGA 190
Query 13356 ACCAGTACCGCAGCGGCGATGGCTGCGATTATGCCGGGACAAAATATTTCGACAAGAATA 13415
| |||||||| ||||||||| |||||||||||||| || || ||||||| || |
Sbjct 189 ATAGGTACCGCACCGGCGATGGGTGCGATTATGCCGGCACGCTTTACTTCGACAGAAACA 130
Query 13416 ACAAGCCGGTTGATGACCCATCGCAGGATGTCTGCCCAGGAACGCTTACGGCCTGCAAAT 13475
|||| ||||| || || || ||||| ||| || ||||| || ||||||||
Sbjct 129 ACAATCCGGTAAGCGATCCCTCATTGGATGAATGCAACGGCACGCTCACCGCCTGCAAGC 70
Query 13476 TACGTCATGGCGAGCACAACGAGCTGCCGTTCGGCGGATTCCCTGGTACGTCGCTGATAA 13535
| || ||| || ||||| || || || ||||| || || || || || || |||| |
Sbjct 69 TTCGGTTTGGTGAACACAATGAACTTCCTTTCGGTGGTTTTCCAGGAACATCTTTGATCA 10
Query 13536 GGAG 13539
||||
Sbjct 9 GGAG 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164998084847164
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