Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_006552.1
Length=65195
Score E
Sequences producing significant alignments: (Bits) Value
seq813 118 4e-22
>seq813
Length=55966
Score = 118 bits (130), Expect = 4e-22
Identities = 226/333 (68%), Gaps = 0/333 (0%)
Strand=Plus/Plus
Query 11164 GCCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTC 11223
|||||| |||| |||||| | ||| | || ||||| || |||||| |||| | ||
Sbjct 13439 GCCGCCCAGCATCTGCATGGTACCGCCAACGTTTACCACAACTTCGGTGGTGTACTTCTC 13498
Query 11224 CTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGA 11283
|||| ||| | ||| || |||||||| || ||||||||| |||||||| ||
Sbjct 13499 AGCGCCGGACTGATCGGTCCATTTACGGGTGCGCAGTTGGCCTTCGATATAGACCTGAGA 13558
Query 11284 GCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTG 11343
|| || ||||| || | | || | ||| ||||| |||||| ||||| || |||||
Sbjct 13559 ACCTTTACGCAGATACTCACCGGCAACTTCTGCCAGTTTGCCAAACAGCACCACGCGGTG 13618
Query 11344 CCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAGTGGC 11403
||| || || |||| | | || |||||| || || |||| |||| ||| ||
Sbjct 13619 CCATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTATCACGCCAGGATTCGGAAGTAGC 13678
Query 11404 CAGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTTGCGTCTGGATCCTGGCC 11463
||| | | | || || || || | ||| | | | | | || || ||||||||
Sbjct 13679 CAGCGTAATGTTGGCAACTGCGCCACCACTCGGCATGTAGCGTACTTCCGGGTCCTGGCC 13738
Query 11464 CAGATGGCCGACCAGGATTACCTTGTTCACTCC 11496
||||| ||||| || || |||||||| || ||
Sbjct 13739 CAGATTACCGACGAGAATCACCTTGTTTACGCC 13771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 208494641295304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |