Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq486 349 4e-91
seq65 93.3 5e-14
>seq486
Length=217039
Score = 349 bits (386), Expect = 4e-91
Identities = 1049/1608 (65%), Gaps = 26/1608 (2%)
Strand=Plus/Plus
Query 61984 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043
||||||| | |||||||| || | | || || || ||||||| ||| |||||||
Sbjct 174754 CCTTGTCAACAGTGAATTGTATTGCATTTACAGCAGGCTTAGTACGTAAATAATACATTC 174813
Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103
| || || | || | |||| | || ||||| || || | ||| ||| | |
Sbjct 174814 CAGTCTTCAAGCCCATTTTCCACGCATAGAAATGAATCGATGTCAATTTTCCATAGTTTG 174873
Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163
| ||||||| |||||| || | |||||||| || || ||||| || || | || || |
Sbjct 174874 GTTCTGCTACATGGATGTTAAATGATTGACTCTGGTCAATGAAAGCACCACGATCCGCGG 174933
Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATA 62222
|||||| || | ||||| | || ||||| | ||| || |||| || |||| |
Sbjct 174934 CCATTTGGATTGTGGTCTTCACAGATATCTCCCACACAGTCTTGTAAAGATCTCTTATT- 174992
Query 62223 TCTTCTGGAAGGTTTGTATT---CTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279
|||| |||| || | | ||||||||||||| | ||||| ||| ||
Sbjct 174993 TCTTTGGGAATACTTTCAATAGACTGAATGGATCCATTGTTGTGTATAATGAGATTTTTC 175052
Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62339
|| ||||||| |||||| | |||||| | | | | ||| || || | || || ||
Sbjct 175053 ATATCATCATCCCATAAATCAGCCTCGGTGAGATCGCGAAGCAGGTGATGGTTGACCACC 175112
Query 62340 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGAC 62399
|| ||||||||||| | ||||| | |||||| || || | || || | ||
Sbjct 175113 TGGAATTCTCCAGAAAGAACTCTTCTTTGGTAAATGTTTGAAGTGAATGGCTCAAATGAT 175172
Query 62400 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62459
||||| || || | ||| || ||||| || || || ||||| || |||| ||| | |
Sbjct 175173 TCATTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGGCATGGGGGCCAGCAACAGAGAG 175232
Query 62460 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62519
|| | || || | | | ||| || | || |||| ||| | ||| || || |
Sbjct 175233 TTCCGCAGGCCATGTTTCGCGATCTTCTGCTTCAGAGCACTCCAGTCCCACAGGTCTGTG 175292
Query 62520 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATA 62578
||| ||| | || || | |||||| | || | || ||||
Sbjct 175293 GGTGTCTTTCCCCACATTTCATATTGCAATATTCCTTCACTGGCCGGACAA-CCAGCATA 175351
Query 62579 TGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATA 62638
|| || || || || || || |||||||| || || ||||| || || |||||
Sbjct 175352 CGTTTCATAAACGCCGAGTTTTTCGGCCAGTTCACAGCTAGCTTCTAAAGCCCCATAATA 175411
Query 62639 AATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATT 62698
|||||||| || || | | ||| || | || ||| | || || | |||
Sbjct 175412 GATGGTTTCAAATATTTGTTGATTGAGCTTCTGGGCTCCTTCACTCTCGTAAGGAAGGCG 175471
Query 62699 TAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62758
| | | ||| || || || | ||||| || ||||| |||||||||| || ||| |
Sbjct 175472 CATCAATACAAAAGCATCGGCCAGACCTTGGACGCCAATGCCGATAGGTCGGTGCCTCAT 175531
Query 62759 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62818
||||| ||| |||||||| | ||||| ||||||| ||| ||||| || || || ||
Sbjct 175532 GTTAGACTTTTTCGCTTCTGGGACGGGATAGTAATTAACATCGATAATCTTGTTCAGGTT 175591
Query 62819 TCTGACA-ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA--- 62874
|| | || | |||| ||| | || ||||| ||||||| || || |
Sbjct 175592 -CTCAGTTATGATTTTGGTCACTTGTTTTAGTTTCTCAAAATCATATGTTTTATTTTCGG 175650
Query 62875 TTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 62934
||||||||||||| | |||| || |||| || ||||| ||||| |||| |||| |
Sbjct 175651 TTACAAACATGTTGACAGCAATTGACGCCAAGTTGCAAACAGCTACTTCATCAGCAGATG 175710
Query 62935 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGAT 62994
|| | | ||||| ||||| ||||| || || ||||| ||||| ||||| | |||||
Sbjct 175711 TGTACTCAACAATCTCCGTGCATAGATTGCTGCATTTGATGGTTCCCAAATTCTTTTGAT 175770
Query 62995 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63054
| |||||| |||| || ||||| || ||||| ||| ||||||| ||||| || | || |
Sbjct 175771 TGCTCTTTCTGTTGCATGCATCTTTGTAAAGCATGTATGGAGTTCCAGTCTCTACTTGTG 175830
Query 63055 ATTCTATAATCGCTTTCCAGACGACTCGAGC-----CTTTATTATAGATTTGTATCTCCT 63109
|| ||||| || ||||| | || | |||| |||| ||| | | | || |
Sbjct 175831 CCTCAATAATAGCCTTCCATAGGATTTGAGCGCGGACTTTTTTA-ACA----AACCTACC 175885
Query 63110 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 63169
|||| ||| ||| ||| ||| || || || ||||||||| || |||| ||
Sbjct 175886 TTCTTGTTCATATTTCTGATATAATGCATCAAATTCATCTCCCCAACAATCAGCCAAGCC 175945
Query 63170 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63229
||| | || | || ||||| | |||||| ||| | || || | ||||| ||
Sbjct 175946 AGGGCTGTCGTGAGGGCACATAAGGCTCCACTCCTCGTTGTTCTCAACCCTCTTCATGAA 176005
Query 63230 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63288
||||| | ||||| ||||| ||| || || |||| | | |||||| || || |
Sbjct 176006 TAGATCTGAGATCCACAGAGC-ATAGAACAGCTCTCGCGCGCGCACTTCCTCTTTGCCCG 176064
Query 63289 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63348
| ||||| || | || |||||| | | || |||| |||||||| || | ||| | ||
Sbjct 176065 TGTTCTTCTTCAAGTCTAGGAACTCGAATATGTCAGCGTGCCACGGCTCGAGGTAGACGG 176124
Query 63349 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63408
| | | || ||||| ||||| || ||||| || | ||| | || ||||| || || |
Sbjct 176125 CGAAGGCGCCGGGCCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACA 176184
Query 63409 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCAC 63468
| | || ||| || | | ||||| || | || || || || | ||| ||| | ||
Sbjct 176185 CGCGCAGCATGGGCACCAGCCCGTTGGAGACGCCGTTCGTGCCCGCGATGTAGGTGCCTT 176244
Query 63469 TGGCACGAATATTACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63527
| || | || | || ||| | ||||| || || || ||| || ||||||||
Sbjct 176245 TCGCTCTGATGCAATGAACATGA-ACTCCTATGCCGCCCGCGGATTTGGATATTAATGCA 176303
Query 63528 CATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATG 63575
|| | || | ||||| |||||||| || ||||| || || |||||
Sbjct 176304 CACTGCTTCAGAGTGTCGTAGATACCTTCGATGCTGTCGTCCTTCATG 176351
>seq65
Length=1244346
Score = 93.3 bits (102), Expect = 5e-14
Identities = 113/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 33595 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33654
|||||||| ||||| | || || ||||| || || ||||||||||| |||||||| ||
Sbjct 630964 TACATTTCAGAATGTACATTCTCCATGGCGATTTGGAATCCGTAGAAGCATCTAGCTTCA 630905
Query 33655 GTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTG 33714
|| | || ||||| | || | |||| | | || ||||| || || || |||
Sbjct 630904 GTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGGTTCTCATTAACAATCCCATCAGAA 630845
Query 33715 GCTGCAAAAAACGCCAATACATGTTTTATAAAAT 33748
|| ||||| || ||||| |||||||| |||||||
Sbjct 630844 GCAGCAAAGAATGCCAAGACATGTTTGATAAAAT 630811
Score = 87.8 bits (96), Expect = 2e-12
Identities = 155/225 (69%), Gaps = 7/225 (3%)
Strand=Plus/Minus
Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385
|||| ||||| || | ||| ||| || || ||||||||||| || || | |||||
Sbjct 631695 CCTCATCTCTGGAGATCAATTCATTGCTGAAGGTCAGTCCGGGCATGAGCCCTCTCTTTT 631636
Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445
||||||| || ||||| ||||| ||||| |||||||| || || ||||| || || |
Sbjct 631635 TAAGCCAGAAGATGGATGCGAAACTGCCAGAGAAGAAGATGCCCTCAACTGCCGCGAATG 631576
Query 33446 CAATAAGTCTCTCTCCATAACCGGCGCTGTCATG-----TATCCACTTTTGAGCCCAATC 33500
| | | ||| || || | | || ||| || ||||||| ||||| ||
Sbjct 631575 CTACTATTCTTTCACC--GAATGTTGCGGTCTTGCTGCCGATCCACTGCATCGCCCAGTC 631518
Query 33501 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545
|||||||| |||||||| || | || || | ||||| || ||
Sbjct 631517 AGCCTTCTTCTTTACACAGGGAAGGGTCTCAACAGCATTGAACAG 631473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622933230409040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |