Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_007022.1
Length=172963
Score E
Sequences producing significant alignments: (Bits) Value
seq637 109 6e-19
seq236 95.1 1e-14
>seq637
Length=122170
Score = 109 bits (120), Expect = 6e-19
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 65588 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65647
||| | ||| || |||||||| || ||||| |||||| | || || || ||| | |
Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165
Query 65648 ATTAAAGCGTACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGATT 65707
||||| ||||| || ||||| || ||||||||||| ||||| |||||||| || ||||
Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225
Query 65708 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 65767
| || ||||| ||| | | |||| | || || ||||| || |||||||||||
Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285
Query 65768 TTC 65770
|||
Sbjct 107286 TTC 107288
>seq236
Length=545527
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/219 (70%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 6973 ATCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGG 7032
|||||| || ||||| ||| ||| || || ||| ||||| || || || || ||
Sbjct 61173 ATCGCCCGGCTGCAGCAGCGCGGTGTAGACCGCGAAGTTAGCCTGGGAGCCAGAGTGCGG 61114
Query 7033 TTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC 7092
|| |||||||| | | | ||| |||||||| ||||| || || |||| | |||
Sbjct 61113 CTGGACGTTTGCATAGTCAGCGCCAAAAAGTTCTTTCGCACGATCGATAGCCAACTGCTC 61054
Query 7093 ---GATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGC 7149
||| ||| || | | |||||||||||||| |||||||| || || || |||||
Sbjct 61053 AACGATATCAACGTACT---CGCAACCGCCGTAATAGCGTTTGCCCGGGTAACCTTCAGC 60997
Query 7150 ATACTTGTTGGTAAAAATAGAACCTTGCGCTTTCATAAC 7188
|| |||||||| | |||||| ||||| | ||| ||
Sbjct 60996 GTATTTGTTGGTCAGCTGAGAACCCTGCGCCTGCATCAC 60958
Score = 93.3 bits (102), Expect = 5e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 65588 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65647
||| ||| || || || || |||| ||| ||||| || || || || || || | |
Sbjct 30895 TTACAGGCTTTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGA 30836
Query 65648 ATTAAAGCGTACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGATT 65707
|| |||||||| ||||| || || || || ||||| ||||| || ||||||||||| |
Sbjct 30835 GTTGAAGCGTACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTG 30776
Query 65708 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 65767
| | || || ||| || | ||| || || |||||||| || |||||||||||
Sbjct 30775 CTCAACCGCGTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACC 30716
Query 65768 TTCAAC 65773
||| ||
Sbjct 30715 TTCCAC 30710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553341191045520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |