Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq637 109 6e-19 seq236 95.1 1e-14 >seq637 Length=122170 Score = 109 bits (120), Expect = 6e-19 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 65588 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65647 ||| | ||| || |||||||| || ||||| |||||| | || || || ||| | | Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165 Query 65648 ATTAAAGCGTACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGATT 65707 ||||| ||||| || ||||| || ||||||||||| ||||| |||||||| || |||| Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225 Query 65708 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 65767 | || ||||| ||| | | |||| | || || ||||| || ||||||||||| Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285 Query 65768 TTC 65770 ||| Sbjct 107286 TTC 107288 >seq236 Length=545527 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 6973 ATCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGG 7032 |||||| || ||||| ||| ||| || || ||| ||||| || || || || || Sbjct 61173 ATCGCCCGGCTGCAGCAGCGCGGTGTAGACCGCGAAGTTAGCCTGGGAGCCAGAGTGCGG 61114 Query 7033 TTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC 7092 || |||||||| | | | ||| |||||||| ||||| || || |||| | ||| Sbjct 61113 CTGGACGTTTGCATAGTCAGCGCCAAAAAGTTCTTTCGCACGATCGATAGCCAACTGCTC 61054 Query 7093 ---GATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGC 7149 ||| ||| || | | |||||||||||||| |||||||| || || || ||||| Sbjct 61053 AACGATATCAACGTACT---CGCAACCGCCGTAATAGCGTTTGCCCGGGTAACCTTCAGC 60997 Query 7150 ATACTTGTTGGTAAAAATAGAACCTTGCGCTTTCATAAC 7188 || |||||||| | |||||| ||||| | ||| || Sbjct 60996 GTATTTGTTGGTCAGCTGAGAACCCTGCGCCTGCATCAC 60958 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 65588 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65647 ||| ||| || || || || |||| ||| ||||| || || || || || || | | Sbjct 30895 TTACAGGCTTTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGA 30836 Query 65648 ATTAAAGCGTACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGATT 65707 || |||||||| ||||| || || || || ||||| ||||| || ||||||||||| | Sbjct 30835 GTTGAAGCGTACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTG 30776 Query 65708 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 65767 | | || || ||| || | ||| || || |||||||| || ||||||||||| Sbjct 30775 CTCAACCGCGTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACC 30716 Query 65768 TTCAAC 65773 ||| || Sbjct 30715 TTCCAC 30710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553341191045520