Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq197 95.1 1e-14
seq11 95.1 1e-14
seq1030 84.2 2e-11
>seq197
Length=620651
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| | || ||||| | |||||| | ||| | ||| |
Sbjct 447876 ATGCAGATTTTCGTCAAAACTCTGACAGGAAAGACCATCACCCTGGAAGTTGAAGCTTCA 447817
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||||||| | || || ||||| ||||| || || || |||||||| |||
Sbjct 447816 GACACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAA 447757
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | ||||| | || || ||||| || || |||| | | | | | |||||| |||
Sbjct 447756 CAGCGTCTCATCTTCGCTGGTAAACAGCTGGAGGATGGTCGCACCTTGTCCGACTACAAC 447697
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| || || ||||| ||||||| || || | || | |||||
Sbjct 447696 ATTCAGAAGGAGTCTACCCTCCATCTTGTTTTGCGTCTGCGCGGAGG 447650
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| | ||||| || | ||||| | ||| | ||| |
Sbjct 447388 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACTCTGGAAGTTGAAGCTTCA 447329
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||||||| | |||||| ||||| |||||||| || || || || || ||
Sbjct 447328 GACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 447269
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | || | | ||||| || || ||||| | | | | | |||||| |||
Sbjct 447268 CAGAGGTTGATCTTTGCAGGCAAGCAGCTTGAAGACGGCCGCACCTTGTCCGACTACAAC 447209
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || ||||||||||| ||||||| || || | || |||||||
Sbjct 447208 ATCCAGAAAGAATCTACCCTCCATCTTGTTTTGCGTCTGCGAGGAGG 447162
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/211 (69%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| ||||||| || | ||||| | ||| | ||| |
Sbjct 446932 ATGCAGATTTTCGTGAAAACCCTAACTGGCAAGACAATCACTCTGGAAGTTGAAGCTTCA 446873
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||||||| | || || ||||| ||||| ||||| || |||||||| ||
Sbjct 446872 GACACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCAG 446813
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAACGTCAGCGACTATA 26946
|| |||| || | || ||| |||||||| ||||| | | | |||| |||||||
Sbjct 446812 CAGCGACTTATCTTCGCCGGTAAACAACTAGAAGACGGCCGTACATTGTCA--GACTATA 446755
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGT 26977
| || || ||||| || ||| | || ||||
Sbjct 446754 ATATCCAGAAAGAGTCGACTCTTCACTTGGT 446724
>seq11
Length=2281484
Score = 95.1 bits (104), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 71669 CAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATT 71728
||||| || || || |||||||| |||| ||| ||| || || ||||| ||
Sbjct 1513533 CAAACTCACGACGAGCTATGGAACTCTGCGCAGATACAACTGGTGAAGGAGGGCAAGCAA 1513474
Query 71729 CACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAG 71788
||||| | ||| ||||||||||||||||| ||||| || |||||||| | | ||| ||
Sbjct 1513473 CACGGCTTCCTGCGCATGTACTGGGCCAAGAAGATACTAGAGTGGACGCCCAGTCCTGAA 1513414
Query 71789 CAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCT 71848
| || || | || || || || || || || ||||| | ||||| | ||| ||
Sbjct 1513413 GATGCCCTGAAATACTCCATATACCTGAATGACCACTACAGCATAGACGGCAGGGATTCT 1513354
Query 71849 AACGGTTATGTCGGT 71863
|| || |||||||||
Sbjct 1513353 AATGGATATGTCGGT 1513339
>seq1030
Length=27445
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 26763 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA 26822
||||| ||||| | || || || || | || || || | |||||| | || | ||
Sbjct 2906 AACAATATGCAGATCTTCGTGAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAG 2847
Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882
| |||||||||||| | |||||| ||||| ||||| || || || || ||
Sbjct 2846 GCTTCCGACACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAGGAGGGTATCCCCCCG 2787
Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942
|| || || |||| || | || || ||||| || || |||| | | | | ||||
Sbjct 2786 GACCAGCAGCGACTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACCCTGTCCGAC 2727
Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
|| ||||| || || |||||||| | || |||| |||| ||||||||||| ||
Sbjct 2726 TACAACATCCAGAAGGAATCTACCCTTCACTTGGTGTTGAGGCTTAGAGGAGGTAA 2671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478651665995680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |